RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CTR9Q6PD62 1173 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 DLK2Q6UY11 383 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
RFX3-201ENST00000302303 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 ATP8A2Q9NTI2 1148 aa11.37□□□□□ -0.59
RFX3-201ENST00000302303 CYP2D7A0A087X1C5 515 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 GNAT2P19087 354 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 LMOD1P29536 600 aaPredicted RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 ANGEL2Q5VTE6 544 aaKnown RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 GIMAP6Q6P9H5 292 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 CERS3Q8IU89 383 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 MAPKAPK5Q8IW41 473 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 KCNB2Q92953 911 aa11.36□□□□□ -0.59
RFX3-201ENST00000302303 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
RFX3-201ENST00000302303 IQCA1LA6NCM1 817 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 TCP10L2B9ZVM9 353 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 USP17L12C9JPN9 530 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 USP17L21D6R901 530 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 ENTPD3O75355 529 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 CYP2D6P10635 497 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 PLCD1P51178 756 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 TCP10Q12799 353 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 FAM83AQ86UY5 434 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 GGA3Q9NZ52 723 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 PALD1Q9ULE6 856 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 RBM8AQ9Y5S9 174 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 EPB41L2O43491 1005 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 CYP21A2P08686 494 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 PICALMQ13492 652 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 RASA3Q14644 834 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 TMEM39BQ9GZU3 492 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
RFX3-201ENST00000302303 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
RFX3-201ENST00000302303 PITPNM2Q9BZ72 1349 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 SIPA1L1O43166 1804 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 BAZ2AQ9UIF9 1905 aaKnown RBP11.34□□□□□ -0.59
RFX3-201ENST00000302303 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
RFX3-201ENST00000302303 KIF3CO14782 793 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 HSPA4P34932 840 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 USP5P45974 858 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 GABPAQ06546 454 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
RFX3-201ENST00000302303 DEFB129Q9H1M3 183 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 ANAPC4Q9UJX5 808 aa11.34□□□□□ -0.59
RFX3-201ENST00000302303 COL2A1P02458 1487 aaPredicted RBP11.33□□□□□ -0.6
RFX3-201ENST00000302303 SLC27A2O14975 620 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 MYO1BO43795 1136 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 REC8O95072 547 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 APPP05067 770 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 FGRP09769 529 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 SLC4A8Q2Y0W8 1093 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 PRAMEF18Q5VWM3 479 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 STOX1Q6ZVD7 989 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 KIF2CQ99661 725 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
RFX3-201ENST00000302303 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
RFX3-201ENST00000302303 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFX3-201ENST00000302303 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
RFX3-201ENST00000302303 CREB3L3Q68CJ9 461 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 TBC1D10CQ8IV04 446 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 NAPBQ9H115 298 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 SSC5DA1L4H1 1573 aa11.32□□□□□ -0.6
RFX3-201ENST00000302303 NAV1Q8NEY1 1877 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 MYH1P12882 1939 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 MYCNP04198 464 aaPredicted RBP11.31□□□□□ -0.6
RFX3-201ENST00000302303 TDO2P48775 406 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 HAND2P61296 217 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 CTDSPL2Q05D32 466 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 PPARAQ07869 468 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
RFX3-201ENST00000302303 ADCK5Q3MIX3 580 aa11.31□□□□□ -0.6
RFX3-201ENST00000302303 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
RFX3-201ENST00000302303 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
RFX3-201ENST00000302303 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms