RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 UBA7P41226 1012 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 ZNF174Q15697 407 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 DIS3L2Q8IYB7 885 aaKnown RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 IFT81Q8WYA0 676 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
PDGFD-201ENST00000302251 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
PDGFD-201ENST00000302251 TRIM75PA6NK02 468 aa13.77□□□□□ -0.2
PDGFD-201ENST00000302251 TICAM2Q86XR7 235 aa13.77□□□□□ -0.2
PDGFD-201ENST00000302251 MIGA1Q8NAN2 632 aa13.77□□□□□ -0.2
PDGFD-201ENST00000302251 ATP5JP18859 108 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
PDGFD-201ENST00000302251 SYCP1Q15431 976 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
PDGFD-201ENST00000302251 GRAMD1CQ8IYS0 662 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
PDGFD-201ENST00000302251 TAB2Q9NYJ8 693 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
PDGFD-201ENST00000302251 ARID5AQ03989 594 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 RGS22Q8NE09 1264 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 AFAP1L1Q8TED9 768 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 TAF4BQ92750 862 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 E2F4Q16254 413 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 OTUD6BQ8N6M0 293 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 LUC7L2Q9Y383 392 aaKnown RBP13.76□□□□□ -0.21
PDGFD-201ENST00000302251 PLEKHG3A1L390 1219 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 GPAA1O43292 621 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
PDGFD-201ENST00000302251 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
PDGFD-201ENST00000302251 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 CDC25BP30305 580 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 POSTNQ15063 836 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 SEPT11Q9NVA2 429 aaKnown RBP13.76□□□□□ -0.21
PDGFD-201ENST00000302251 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
PDGFD-201ENST00000302251 TNRQ92752 1358 aa13.76□□□□□ -0.21
PDGFD-201ENST00000302251 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 ENC1O14682 589 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 GOLGA6L7A0A1B0GV03 622 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 GCP02774 474 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 IQCA1Q86XH1 822 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 LINC00301Q8NCQ3 95 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
PDGFD-201ENST00000302251 TECPR2O15040 1411 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
PDGFD-201ENST00000302251 USP5P45974 858 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 LIG3P49916 1009 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 BLZF1Q9H2G9 400 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 ADAM21Q9UKJ8 722 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 RRP15Q9Y3B9 282 aaKnown RBP13.75□□□□□ -0.21
PDGFD-201ENST00000302251 HSF2BPO75031 334 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 MCM7P33993 719 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 POLA2Q14181 598 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
PDGFD-201ENST00000302251 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 ST5P78524 1137 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 TMCO5BA8MYB1 307 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 CMA1P23946 247 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 NOP2P46087 812 aaKnown RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 E4F1Q66K89 784 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 SMYD4Q8IYR2 804 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 IP6K1Q92551 441 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 CCDC42Q96M95 316 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 METTL22Q9BUU2 404 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 ANKRD18BA2A2Z9 1011 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 MYO1CO00159 1063 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 TRIM66O15016 1216 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 KRT86O43790 486 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 FGAP02671 866 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 ZAP70P43403 619 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 RBM6P78332 1123 aaKnown RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
PDGFD-201ENST00000302251 ZFYVE27Q5T4F4 411 aa13.74□□□□□ -0.21
PDGFD-201ENST00000302251 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
PDGFD-201ENST00000302251 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
PDGFD-201ENST00000302251 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms