RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ERCC3P19447 782 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 TXLNAP40222 546 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 MYL5Q02045 173 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 JCADQ9P266 1359 aa16.08■□□□□ 0.16
SDC2-201ENST00000302190 EIF5P55010 431 aaKnown RBP16.07■□□□□ 0.16
SDC2-201ENST00000302190 MTX1Q13505 466 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 GNL3LQ9NVN8 582 aaKnown RBP16.07■□□□□ 0.16
SDC2-201ENST00000302190 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 N4BP3O15049 544 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■□□□ 11.9
SDC2-201ENST00000302190 LRP6O75581 1613 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 GRAMD1CQ8IYS0 662 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
SDC2-201ENST00000302190 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
SDC2-201ENST00000302190 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 PDIA6Q15084 440 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 ZNF174Q15697 407 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 NFE2L3Q9Y4A8 694 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 SPATA31A5Q5VU36 1347 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 SPATA31A7Q8IWB4 1347 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 KIF5CO60282 957 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
SDC2-201ENST00000302190 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 GREM2Q9H772 168 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 ELP1O95163 1332 aa16.06■□□□□ 0.16
SDC2-201ENST00000302190 USP5P45974 858 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 ST3GAL1Q11201 340 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
SDC2-201ENST00000302190 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 TANGO6Q9C0B7 1094 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 QTRT2Q9H974 415 aaKnown RBP16.05■□□□□ 0.16
SDC2-201ENST00000302190 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
SDC2-201ENST00000302190 PHKA1P46020 1223 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 FEZ1Q99689 392 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 VWA3AA6NCI4 1184 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 SCARF1Q14162 830 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 ZMYM1Q5SVZ6 1142 aa16.05■□□□□ 0.16
SDC2-201ENST00000302190 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
SDC2-201ENST00000302190 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
SDC2-201ENST00000302190 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
SDC2-201ENST00000302190 RCOR1Q9UKL0 485 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 RHOXF2BP0C7M4 288 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 RHOXF2Q9BQY4 288 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 LMAN1P49257 510 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 EVCP57679 992 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 KRI1Q8N9T8 703 aaKnown RBP16.04■□□□□ 0.16
SDC2-201ENST00000302190 SDR42E1Q8WUS8 393 aa16.04■□□□□ 0.16
SDC2-201ENST00000302190 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDC2-201ENST00000302190 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.168e-7■■□□□ 13.3
SDC2-201ENST00000302190 KIAA1328Q86T90 577 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 HINFPQ9BQA5 517 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 CEP131Q9UPN4 1083 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 NCAPD2Q15021 1401 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 MCM7P33993 719 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
SDC2-201ENST00000302190 VPS16Q9H269 839 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 DEF6Q9H4E7 631 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 CALCOCO1Q9P1Z2 691 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
SDC2-201ENST00000302190 JAKMIP3Q5VZ66 844 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 UIMC1Q96RL1 719 aa16.03■□□□□ 0.16
SDC2-201ENST00000302190 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
SDC2-201ENST00000302190 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.16
SDC2-201ENST00000302190 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
SDC2-201ENST00000302190 ZNF274Q96GC6 653 aaPredicted RBP16.02■□□□□ 0.16
SDC2-201ENST00000302190 DENND2AQ9ULE3 1009 aa16.02■□□□□ 0.16
SDC2-201ENST00000302190 PRKAB2O43741 272 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 ATP6V1AP38606 617 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 PPARDQ03181 441 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.15
SDC2-201ENST00000302190 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.15
SDC2-201ENST00000302190 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms