RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
UBXN1-202ENST00000301935 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
UBXN1-202ENST00000301935 CCL15Q16663 113 aa18.34■□□□□ 0.53
UBXN1-202ENST00000301935 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
UBXN1-202ENST00000301935 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
UBXN1-202ENST00000301935 CSADQ9Y600 493 aa18.34■□□□□ 0.53
UBXN1-202ENST00000301935 GTF2A2P52657 109 aa18.33■□□□□ 0.52
UBXN1-202ENST00000301935 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-202ENST00000301935 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
UBXN1-202ENST00000301935 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-202ENST00000301935 OTUD5Q96G74 571 aa18.33■□□□□ 0.52
UBXN1-202ENST00000301935 ZSWIM8A7E2V4 1837 aa18.33■□□□□ 0.52
UBXN1-202ENST00000301935 SPDYE5A6NIY4 337 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 FRAT2O75474 233 aaPredicted RBP18.32■□□□□ 0.52
UBXN1-202ENST00000301935 CACNB3P54284 484 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 TEKT1Q969V4 418 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
UBXN1-202ENST00000301935 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
UBXN1-202ENST00000301935 SEMA3EO15041 775 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 CCDC102BQ68D86 513 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
UBXN1-202ENST00000301935 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
UBXN1-202ENST00000301935 MAST3O60307 1309 aa18.3■□□□□ 0.52
UBXN1-202ENST00000301935 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
UBXN1-202ENST00000301935 ADORA1P30542 326 aa18.3■□□□□ 0.52
UBXN1-202ENST00000301935 ZNF333Q96JL9 665 aa18.3■□□□□ 0.52
UBXN1-202ENST00000301935 ZDHHC15Q96MV8 337 aa18.3■□□□□ 0.52
UBXN1-202ENST00000301935 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
UBXN1-202ENST00000301935 BCAMP50895 628 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 ARHGEF6Q15052 776 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 WRNIP1Q96S55 665 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 HAUS7Q99871 368 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
UBXN1-202ENST00000301935 EN2P19622 333 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-202ENST00000301935 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
UBXN1-202ENST00000301935 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
UBXN1-202ENST00000301935 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
UBXN1-202ENST00000301935 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
UBXN1-202ENST00000301935 PTCH2Q9Y6C5 1203 aa18.28■□□□□ 0.52
UBXN1-202ENST00000301935 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
UBXN1-202ENST00000301935 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
UBXN1-202ENST00000301935 IGSF3O75054 1194 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 CETPP11597 493 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 PHKA1P46020 1223 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 SKAP1Q86WV1 359 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 ZKSCAN4Q969J2 545 aaPredicted RBP18.27■□□□□ 0.52
UBXN1-202ENST00000301935 EVI5LQ96CN4 794 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 TMEM106CQ9BVX2 250 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
UBXN1-202ENST00000301935 DENND2AQ9ULE3 1009 aa18.27■□□□□ 0.52
UBXN1-202ENST00000301935 IRF6O14896 467 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 TLR2O60603 784 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
UBXN1-202ENST00000301935 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
UBXN1-202ENST00000301935 PPIL2Q13356 520 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 TTF1Q15361 905 aaPredicted RBP18.26■□□□□ 0.51
UBXN1-202ENST00000301935 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
UBXN1-202ENST00000301935 HHIPL2Q6UWX4 724 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
UBXN1-202ENST00000301935 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
UBXN1-202ENST00000301935 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
UBXN1-202ENST00000301935 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
UBXN1-202ENST00000301935 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
UBXN1-202ENST00000301935 DCAF15Q66K64 600 aa18.25■□□□□ 0.51
UBXN1-202ENST00000301935 TRIM6-TRIM34B2RNG4 842 aa18.24■□□□□ 0.51
UBXN1-202ENST00000301935 GSPT1P15170 499 aaKnown RBP18.24■□□□□ 0.51
UBXN1-202ENST00000301935 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
UBXN1-202ENST00000301935 SPATA5Q8NB90 893 aa18.24■□□□□ 0.51
UBXN1-202ENST00000301935 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
UBXN1-202ENST00000301935 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
UBXN1-202ENST00000301935 DOCK2Q92608 1830 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 HIP1O00291 1037 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 SDSP20132 328 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 MCAMP43121 646 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 PPATQ06203 517 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 KIF22Q14807 665 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 TMED8Q6PL24 325 aaPredicted RBP18.23■□□□□ 0.51
UBXN1-202ENST00000301935 WDR66Q8TBY9 1149 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
UBXN1-202ENST00000301935 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
UBXN1-202ENST00000301935 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 HMG20BQ9P0W2 317 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
UBXN1-202ENST00000301935 GNRH1P01148 92 aa18.21■□□□□ 0.51
UBXN1-202ENST00000301935 INPP5BP32019 993 aa18.21■□□□□ 0.51
UBXN1-202ENST00000301935 SLC4A8Q2Y0W8 1093 aa18.21■□□□□ 0.51
UBXN1-202ENST00000301935 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms