RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ERO1AQ96HE7 468 aa13.82□□□□□ -0.2
ABCA3-201ENST00000301732 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
ABCA3-201ENST00000301732 ANKLE2Q86XL3 938 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 PLEKHM2Q8IWE5 1019 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 MRPL50Q8N5N7 158 aaKnown RBP13.81□□□□□ -0.2
ABCA3-201ENST00000301732 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 RIPOR2Q9Y4F9 1068 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 TACC3Q9Y6A5 838 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 KRT15P19012 456 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 ABCB4P21439 1286 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 GABPAQ06546 454 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
ABCA3-201ENST00000301732 AFG3L2Q9Y4W6 797 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 A0A1B0GUA9 196 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 GRM8O00222 908 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 ARMT1Q9H993 441 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 OPHN1O60890 802 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 USH1GQ495M9 461 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 USP26Q9BXU7 913 aa13.81□□□□□ -0.2
ABCA3-201ENST00000301732 CSPG5O95196 566 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 ATP6V1AP38606 617 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 E2F5Q15329 346 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
ABCA3-201ENST00000301732 LMNTD2Q8IXW0 634 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 EXOC5O00471 708 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 IL1RL1Q01638 556 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 PIK3R4Q99570 1358 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 GBP1P32455 592 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 ZNF75DP51815 510 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 GMNNO75496 209 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CHMLP26374 656 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 SPAG1Q07617 926 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CLUL1Q15846 466 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CEP85Q6P2H3 762 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 G2E3Q7L622 706 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CACNA2D3Q8IZS8 1091 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 NUF2Q9BZD4 464 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 BZW2Q9Y6E2 419 aaKnown RBP13.8□□□□□ -0.2
ABCA3-201ENST00000301732 MBD4O95243 580 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CLTAP09496 248 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
ABCA3-201ENST00000301732 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
ABCA3-201ENST00000301732 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 GNGT1P63211 74 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 PKP1Q13835 747 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 ZSCAN26Q16670 478 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 CSGALNACT2Q8N6G5 542 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 SMIM24O75264 130 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 FYB2Q5VWT5 728 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 MTUS1Q9ULD2 1270 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 V9GY48 417 aaPredicted RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 DAPK3O43293 454 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 COG7P83436 770 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 HS2ST1Q7LGA3 356 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 KCNH5Q8NCM2 988 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 MRPL46Q9H2W6 279 aaKnown RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
ABCA3-201ENST00000301732 ASIC2Q16515 512 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 NCAPH2Q6IBW4 605 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 LRRC27Q9C0I9 530 aa13.79□□□□□ -0.2
ABCA3-201ENST00000301732 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 RABGAP1Q9Y3P9 1069 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 ITIH3Q06033 890 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 MAP2K2P36507 400 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 TAF12Q16514 161 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
ABCA3-201ENST00000301732 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 ATP8B2P98198 1209 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
ABCA3-201ENST00000301732 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms