RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 DOCK2Q92608 1830 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 ENTPD3O75355 529 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 TTF1Q15361 905 aaPredicted RBP22.13■■□□□ 1.13
SPSB3-201ENST00000301717 MAPKAPK5Q8IW41 473 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.13■■□□□ 1.131e-7■■■□□ 19
SPSB3-201ENST00000301717 TGFBRAP1Q8WUH2 860 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 WRNIP1Q96S55 665 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 CSRNP1Q96S65 589 aa22.13■■□□□ 1.13
SPSB3-201ENST00000301717 NOL10Q9BSC4 688 aaKnown RBP22.13■■□□□ 1.13
SPSB3-201ENST00000301717 ATRNL1Q5VV63 1379 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 ZNF532Q9HCE3 1301 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 FAM196BA6NMK8 535 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 BAG3O95817 575 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 GJA5P36382 358 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 PPP4CP60510 307 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 VGLL4Q14135 290 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 ZKSCAN4Q969J2 545 aaPredicted RBP22.12■■□□□ 1.13
SPSB3-201ENST00000301717 SLC10A4Q96EP9 437 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 RWDD1Q9H446 243 aaPredicted RBP22.12■■□□□ 1.13
SPSB3-201ENST00000301717 OTOFQ9HC10 1997 aa22.12■■□□□ 1.13
SPSB3-201ENST00000301717 TCRBV5S4A2TA0A5A2 114 aa22.11■■□□□ 1.13
SPSB3-201ENST00000301717 INPP5BP32019 993 aa22.11■■□□□ 1.13
SPSB3-201ENST00000301717 MAP2K1Q02750 393 aaPredicted RBP22.11■■□□□ 1.13
SPSB3-201ENST00000301717 SLC4A8Q2Y0W8 1093 aa22.11■■□□□ 1.13
SPSB3-201ENST00000301717 ANKRD13AQ8IZ07 590 aa22.11■■□□□ 1.13
SPSB3-201ENST00000301717 LNPKQ9C0E8 428 aa22.11■■□□□ 1.13
SPSB3-201ENST00000301717 SALL3Q9BXA9 1300 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 SPRYD7Q5W111 196 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 SMC5Q8IY18 1101 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 PI4K2BQ8TCG2 481 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 GPATCH3Q96I76 525 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 WNK4Q96J92 1243 aa22.1■■□□□ 1.13
SPSB3-201ENST00000301717 OSBPL5Q9H0X9 879 aaPredicted RBP22.1■■□□□ 1.13
SPSB3-201ENST00000301717 FLT1P17948 1338 aa22.09■■□□□ 1.13
SPSB3-201ENST00000301717 RIOK1Q9BRS2 568 aaKnown RBP22.09■■□□□ 1.13
SPSB3-201ENST00000301717 ZNF341Q9BYN7 854 aa22.09■■□□□ 1.13
SPSB3-201ENST00000301717 SAP30BPQ9UHR5 308 aaKnown RBP22.09■■□□□ 1.13
SPSB3-201ENST00000301717 MX1P20591 662 aa22.08■■□□□ 1.13
SPSB3-201ENST00000301717 DCAF15Q66K64 600 aa22.08■■□□□ 1.13
SPSB3-201ENST00000301717 AIDAQ96BJ3 306 aa22.08■■□□□ 1.13
SPSB3-201ENST00000301717 ZBTB47Q9UFB7 747 aaPredicted RBP22.08■■□□□ 1.13
SPSB3-201ENST00000301717 SNCAIPQ9Y6H5 919 aa22.08■■□□□ 1.13
SPSB3-201ENST00000301717 ADD2P35612 726 aa22.07■■□□□ 1.12
SPSB3-201ENST00000301717 OPTNQ96CV9 577 aa22.07■■□□□ 1.12
SPSB3-201ENST00000301717 AK9Q5TCS8 1911 aa22.07■■□□□ 1.12
SPSB3-201ENST00000301717 MAGEB6P1A0A0J9YX57 407 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 PLCG2P16885 1265 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 LCORLQ8N3X6 602 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 HOOK2Q96ED9 719 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 OTUD5Q96G74 571 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 CSADQ9Y600 493 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 TTC41PQ6P2S7 1318 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 NPM3O75607 178 aaKnown RBP22.06■■□□□ 1.12
SPSB3-201ENST00000301717 HSPA8P11142 646 aaKnown RBP22.06■■□□□ 1.12
SPSB3-201ENST00000301717 ARMT1Q9H993 441 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.06■■□□□ 1.12
SPSB3-201ENST00000301717 PALD1Q9ULE6 856 aa22.06■■□□□ 1.12
SPSB3-201ENST00000301717 PHF20L1A8MW92 1017 aa22.05■■□□□ 1.12
SPSB3-201ENST00000301717 IGSF3O75054 1194 aa22.05■■□□□ 1.12
SPSB3-201ENST00000301717 LBX1P52954 281 aa22.05■■□□□ 1.12
SPSB3-201ENST00000301717 BEGAINQ9BUH8 593 aa22.05■■□□□ 1.12
SPSB3-201ENST00000301717 ZNF112Q9UJU3 913 aa22.05■■□□□ 1.12
SPSB3-201ENST00000301717 MBD4O95243 580 aa22.04■■□□□ 1.12
SPSB3-201ENST00000301717 USP5P45974 858 aa22.04■■□□□ 1.12
SPSB3-201ENST00000301717 EVX2Q03828 476 aa22.04■■□□□ 1.12
SPSB3-201ENST00000301717 KBTBD3Q8NAB2 608 aa22.04■■□□□ 1.12
SPSB3-201ENST00000301717 SDR42E1Q8WUS8 393 aa22.04■■□□□ 1.12
SPSB3-201ENST00000301717 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.04■■□□□ 1.122e-17■■■■■ 95.5
SPSB3-201ENST00000301717 ERC2O15083 957 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 PRKAB2O43741 272 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 TRPA1O75762 1119 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 GLRX3O76003 335 aaKnown RBP22.03■■□□□ 1.12
SPSB3-201ENST00000301717 PDE1AP54750 535 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 NUCB1Q02818 461 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 RRP1BQ14684 758 aaKnown RBP22.03■■□□□ 1.12
SPSB3-201ENST00000301717 CHD1LQ86WJ1 897 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 PUS7LQ9H0K6 701 aaKnown RBP22.03■■□□□ 1.12
SPSB3-201ENST00000301717 RNF186Q9NXI6 227 aa22.03■■□□□ 1.12
SPSB3-201ENST00000301717 CDK5RAP2Q96SN8 1893 aa22.02■■□□□ 1.12
SPSB3-201ENST00000301717 UNCXA6NJT0 531 aa22.02■■□□□ 1.12
SPSB3-201ENST00000301717 ZBTB48P10074 688 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-201ENST00000301717 CTCFP49711 727 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-201ENST00000301717 CCDC84Q86UT8 332 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-201ENST00000301717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.02■■□□□ 1.12
SPSB3-201ENST00000301717 COL2A1P02458 1487 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-201ENST00000301717 SPDYE5A6NIY4 337 aa22.01■■□□□ 1.11
SPSB3-201ENST00000301717 MAP3K10Q02779 954 aa22.01■■□□□ 1.11
SPSB3-201ENST00000301717 COL13A1Q5TAT6 717 aaPredicted RBP22.01■■□□□ 1.11
SPSB3-201ENST00000301717 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
SPSB3-201ENST00000301717 STAP2Q9UGK3 403 aa22.01■■□□□ 1.11
SPSB3-201ENST00000301717 SIPA1L1O43166 1804 aa22■■□□□ 1.11
SPSB3-201ENST00000301717 IGF2BP3O00425 579 aaKnown RBP eCLIP22■■□□□ 1.11
SPSB3-201ENST00000301717 UBE3CQ15386 1083 aa22■■□□□ 1.11
SPSB3-201ENST00000301717 SHROOM1Q2M3G4 852 aaPredicted RBP22■■□□□ 1.11
SPSB3-201ENST00000301717 IRF6O14896 467 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 TM4SF4P48230 202 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 ERO1BQ86YB8 467 aa21.99■■□□□ 1.11
SPSB3-201ENST00000301717 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms