RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 PLCH2O75038 1416 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 ARHGEF2Q92974 986 aaKnown RBP12.59□□□□□ -0.39
GCN1-201ENST00000300648 DRC3Q9H069 523 aa12.59□□□□□ -0.39
GCN1-201ENST00000300648 DKC1O60832 514 aaKnown RBP eCLIP12.58□□□□□ -0.39
GCN1-201ENST00000300648 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 PHBP35232 272 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 SV2BQ7L1I2 683 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 MAST1Q9Y2H9 1570 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 ATP8B1O43520 1251 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.49e-7■■□□□ 13.1
GCN1-201ENST00000300648 ANKRD20A3Q5VUR7 823 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 MIER3Q7Z3K6 550 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 GTF3C6Q969F1 213 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
GCN1-201ENST00000300648 HOXB7P09629 217 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 HPDP32754 393 aaPredicted RBP12.57□□□□□ -0.4
GCN1-201ENST00000300648 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
GCN1-201ENST00000300648 EIF2AQ9BY44 585 aaKnown RBP12.57□□□□□ -0.4
GCN1-201ENST00000300648 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 TRAPPC8Q9Y2L5 1435 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 GOLGA5Q8TBA6 731 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 KLHL14Q9P2G3 628 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 SPOPO43791 374 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 GEN1Q17RS7 908 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 MUM1Q2TAK8 710 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 UBE3BQ7Z3V4 1068 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 TRIM58Q8NG06 486 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
GCN1-201ENST00000300648 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 SH3BP5O60239 455 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 ZKSCAN3Q9BRR0 538 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 FLT4P35916 1363 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 HHATQ5VTY9 493 aa12.57□□□□□ -0.4
GCN1-201ENST00000300648 SATB1Q01826 763 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 GRK7Q8WTQ7 553 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 BCRP11274 1271 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 ZMYM4Q5VZL5 1548 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 TLDC2A0PJX2 215 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 KIF11P52732 1056 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 TYW1Q9NV66 732 aaKnown RBP12.56□□□□□ -0.4
GCN1-201ENST00000300648 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 ZNF131P52739 623 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
GCN1-201ENST00000300648 DHX58Q96C10 678 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 ZMAT2Q96NC0 199 aaKnown RBP12.56□□□□□ -0.4
GCN1-201ENST00000300648 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
GCN1-201ENST00000300648 GRM8O00222 908 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 CUTAO60888 179 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 PRR16Q569H4 304 aa12.56□□□□□ -0.4
GCN1-201ENST00000300648 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
GCN1-201ENST00000300648 SLMAPQ14BN4 828 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 FAM71BQ8TC56 605 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 CCDC170Q8IYT3 715 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 CLSTN2Q9H4D0 955 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
GCN1-201ENST00000300648 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 NOS1P29475 1434 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
GCN1-201ENST00000300648 RLBP1P12271 317 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 DEXIO95424 95 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
GCN1-201ENST00000300648 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
GCN1-201ENST00000300648 LRCH2Q5VUJ6 765 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 ISM2Q6H9L7 571 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 MAN1A1P33908 653 aa12.54□□□□□ -0.4
GCN1-201ENST00000300648 ZNF75DP51815 510 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms