RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 ESF1Q9H501 851 aaKnown RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 MAN1B1Q9UKM7 699 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 CASP14P31944 242 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 SERTAD1Q9UHV2 236 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 GUCA1BQ9UMX6 200 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 ERLIN2O94905 339 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 CDC25AP30304 524 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
SNX20-201ENST00000300590 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 KRT40Q6A162 431 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 POLD4Q9HCU8 107 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 RAB21Q9UL25 225 aa12.5□□□□□ -0.41
SNX20-201ENST00000300590 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 AFMP43652 599 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 GCKRQ14397 625 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 SMYD4Q8IYR2 804 aaPredicted RBP12.49□□□□□ -0.41
SNX20-201ENST00000300590 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 MAST3O60307 1309 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 M0R2C6 588 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 MSANTD4Q8NCY6 345 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
SNX20-201ENST00000300590 GBP3Q9H0R5 595 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 TRIM10Q9UDY6 481 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 MRPS25P82663 173 aaKnown RBP12.49□□□□□ -0.41
SNX20-201ENST00000300590 TRDNQ13061 729 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
SNX20-201ENST00000300590 AGLP35573 1532 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 C3P01024 1663 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 HOXB7P09629 217 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 IFIT1P09914 478 aaKnown RBP12.48□□□□□ -0.41
SNX20-201ENST00000300590 USP5P45974 858 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 POSTNQ15063 836 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
SNX20-201ENST00000300590 KAT2BQ92831 832 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
SNX20-201ENST00000300590 JCADQ9P266 1359 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 EXOC5O00471 708 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 PES1O00541 588 aaKnown RBP12.48□□□□□ -0.41
SNX20-201ENST00000300590 MCTP2Q6DN12 878 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 CCDC148Q8NFR7 591 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 STAMQ92783 540 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
SNX20-201ENST00000300590 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
SNX20-201ENST00000300590 A0A087WZG4 1122 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 SYF2O95926 243 aaKnown RBP12.47□□□□□ -0.41
SNX20-201ENST00000300590 GGCXP38435 758 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
SNX20-201ENST00000300590 MED15Q96RN5 788 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 TRIM29Q14134 588 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 MYO6Q9UM54 1294 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 H0YHG0 523 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 EBAG9O00559 213 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 FGAP02671 866 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 A1BGP04217 495 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 PSEN1P49768 467 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 FXR1P51114 621 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNX20-201ENST00000300590 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
SNX20-201ENST00000300590 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
SNX20-201ENST00000300590 RPS6KA5O75582 802 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 MAP2K2P36507 400 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 STIM1Q13586 685 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 NR1I3Q14994 352 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.41
SNX20-201ENST00000300590 ZMYM1Q5SVZ6 1142 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 RESP18Q5W5W9 173 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 ANKRD20A12PQ8NF67 263 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.41
SNX20-201ENST00000300590 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
SNX20-201ENST00000300590 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms