RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 RRP12Q5JTH9 1297 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 ZSWIM5Q9P217 1185 aa18.48■□□□□ 0.55
HERPUD1-201ENST00000300302 BAZ2AQ9UIF9 1905 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 BTDP43251 543 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 AMOTL1Q8IY63 956 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 KLHL34Q8N239 644 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 ESR2Q92731 530 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 INCENPQ9NQS7 918 aa18.47■□□□□ 0.55
HERPUD1-201ENST00000300302 TMEM67Q5HYA8 995 aa18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 LARP1BQ659C4 914 aaKnown RBP18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 GAKO14976 1311 aa18.46■□□□□ 0.55
HERPUD1-201ENST00000300302 ERICH2A1L162 156 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 GOLGA8BA8MQT2 603 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 IFIT3O14879 490 aaKnown RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 C21orf2O43822 256 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 LIFRP42702 1097 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 CCT2P78371 535 aaKnown RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 CCDC93Q567U6 631 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 RTKN2Q8IZC4 609 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 IGDCC4Q8TDY8 1250 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.54
HERPUD1-201ENST00000300302 LAMB1P07942 1786 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 TGFB2P61812 414 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 MCM9Q9NXL9 1143 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 TACC3Q9Y6A5 838 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
HERPUD1-201ENST00000300302 ECE2O60344 883 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 FGRP09769 529 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 SGMS1Q86VZ5 419 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 TMTC2Q8N394 836 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 FAM184AQ8NB25 1140 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
HERPUD1-201ENST00000300302 CYP2D7A0A087X1C5 515 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 NT5C2P49902 561 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 PDE4BQ07343 736 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 NSUN7Q8NE18 718 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 LY9Q9HBG7 655 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 MKRN1Q9UHC7 482 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 TTF2Q9UNY4 1162 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 CCDC69A6NI79 296 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 CERS5Q8N5B7 392 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 NKX2-3Q8TAU0 364 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 NCOA5Q9HCD5 579 aaKnown RBP18.43■□□□□ 0.54
HERPUD1-201ENST00000300302 VPS37CA5D8V6 355 aaPredicted RBP18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 ORC4O43929 436 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 JAK2O60674 1132 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 WTAPQ15007 396 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 AOC3Q16853 763 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 MTMR6Q9Y217 621 aa18.42■□□□□ 0.54
HERPUD1-201ENST00000300302 PTPDC1A2A3K4 754 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 F8W031 263 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 CPLX1O14810 134 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 F13A1P00488 732 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 USP17L8P0C7I0 530 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 APOA5Q6Q788 366 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 IQCA1Q86XH1 822 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 PSMD1Q99460 953 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 SLC12A7Q9Y666 1083 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 ZBTB43O43298 467 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 CTDNEP1O95476 244 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 SKOR2Q2VWA4 1001 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 HHIPL2Q6UWX4 724 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 TEKT1Q969V4 418 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
HERPUD1-201ENST00000300302 DTNBO60941 627 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms