RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
GABRB3-201ENST00000299267 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 CPLX3Q8WVH0 158 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 SLIT1O75093 1534 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 ARHGEF28Q8N1W1 1705 aaKnown RBP11.68□□□□□ -0.54
GABRB3-201ENST00000299267 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 ADD2P35612 726 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 SLC1A4P43007 532 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 DHX58Q96C10 678 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 CCDC39Q9UFE4 941 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 DIS3L2Q8IYB7 885 aaKnown RBP11.68□□□□□ -0.54
GABRB3-201ENST00000299267 TNKSO95271 1327 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
GABRB3-201ENST00000299267 USH1GQ495M9 461 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 DYNLL2Q96FJ2 89 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 HOMER2Q9NSB8 354 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
GABRB3-201ENST00000299267 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 DDX19AQ9NUU7 478 aaKnown RBP11.67□□□□□ -0.54
GABRB3-201ENST00000299267 PIK3AP1Q6ZUJ8 805 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 ZNF654Q8IZM8 581 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 MECOMQ03112 1051 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 TNIP1Q15025 636 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 CCDC178Q5BJE1 867 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-201ENST00000299267 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
GABRB3-201ENST00000299267 PPFIBP1Q86W92 1011 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 ZSWIM6Q9HCJ5 1215 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 PXDNQ92626 1479 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 VWA3AA6NCI4 1184 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 ZFYVE27Q5T4F4 411 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 KRT2P35908 639 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 CALML4Q96GE6 196 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 CPDO75976 1380 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 CCDC173Q0VFZ6 552 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 KRT40Q6A162 431 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
GABRB3-201ENST00000299267 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
GABRB3-201ENST00000299267 H7C1D1 291 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 NF2P35240 595 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 TTLL6Q8N841 843 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 TM6SF1Q9BZW5 370 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 SMARCE1Q969G3 411 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 SCLT1Q96NL6 688 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 NPR1P16066 1061 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
GABRB3-201ENST00000299267 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
GABRB3-201ENST00000299267 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
GABRB3-201ENST00000299267 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-201ENST00000299267 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 ZNF34Q8IZ26 560 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 LARGE1O95461 756 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 CALML3P27482 149 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 PRR5LQ6MZQ0 368 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 STAMQ92783 540 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 MASTLQ96GX5 879 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 KAZALD1Q96I82 304 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 DEXIO95424 95 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 CYP2D6P10635 497 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
GABRB3-201ENST00000299267 GDF11O95390 407 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 STAT6P42226 847 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 STX17P56962 302 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 ZSCAN10Q96SZ4 725 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-201ENST00000299267 PICK1Q9NRD5 415 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 ZSWIM5Q9P217 1185 aa11.64□□□□□ -0.55
GABRB3-201ENST00000299267 ARPP21Q9UBL0 812 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-201ENST00000299267 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 SLC27A3Q5K4L6 730 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 CCDC174Q6PII3 467 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 CD209Q9NNX6 404 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 ZNF277Q9NRM2 450 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms