RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 ELP3Q9H9T3 547 aa14.58□□□□□ -0.08
CDK5-201ENST00000297518 AATFQ9NY61 560 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDK5-201ENST00000297518 CSADQ9Y600 493 aa14.58□□□□□ -0.08
CDK5-201ENST00000297518 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
CDK5-201ENST00000297518 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 GOLIM4O00461 696 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 CYP7A1P22680 504 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 PPP4CP60510 307 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 SREBF2Q12772 1141 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 VGLL4Q14135 290 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 MIGA2Q7L4E1 593 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 ZSCAN29Q8IWY8 852 aaPredicted RBP14.57□□□□□ -0.08
CDK5-201ENST00000297518 MAGEB6Q8N7X4 407 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 SH3RF3Q8TEJ3 882 aaPredicted RBP14.57□□□□□ -0.08
CDK5-201ENST00000297518 PRDM10Q9NQV6 1147 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 SAGE1Q9NXZ1 904 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 TSKSQ9UJT2 592 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
CDK5-201ENST00000297518 ATRNL1Q5VV63 1379 aa14.57□□□□□ -0.08
CDK5-201ENST00000297518 DDTLA6NHG4 134 aaPredicted RBP14.56□□□□□ -0.08
CDK5-201ENST00000297518 GJA5P36382 358 aa14.56□□□□□ -0.08
CDK5-201ENST00000297518 COL13A1Q5TAT6 717 aaPredicted RBP14.56□□□□□ -0.08
CDK5-201ENST00000297518 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
CDK5-201ENST00000297518 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
CDK5-201ENST00000297518 OSBPL5Q9H0X9 879 aaPredicted RBP14.56□□□□□ -0.08
CDK5-201ENST00000297518 BOLA2Q9H3K6 86 aa14.56□□□□□ -0.08
CDK5-201ENST00000297518 PAG1Q9NWQ8 432 aa14.56□□□□□ -0.08
CDK5-201ENST00000297518 MANSC4A6NHS7 340 aaPredicted RBP14.55□□□□□ -0.08
CDK5-201ENST00000297518 TRPA1O75762 1119 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 TM4SF4P48230 202 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 DYNLL1P63167 89 aaKnown RBP14.55□□□□□ -0.08
CDK5-201ENST00000297518 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
CDK5-201ENST00000297518 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 MIGA1Q8NAN2 632 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 EXOC6Q8TAG9 804 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
CDK5-201ENST00000297518 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
CDK5-201ENST00000297518 HAUS7Q99871 368 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 ECHDC1Q9NTX5 307 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 RNF186Q9NXI6 227 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 ZNF112Q9UJU3 913 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 SNCAIPQ9Y6H5 919 aa14.55□□□□□ -0.08
CDK5-201ENST00000297518 SPDYE5A6NIY4 337 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 PDE6AP16499 860 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 INPP5BP32019 993 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 INHBEP58166 350 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 SLC9C2Q5TAH2 1124 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 ERO1BQ86YB8 467 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 MYH7P12883 1935 aa14.54□□□□□ -0.08
CDK5-201ENST00000297518 FLT1P17948 1338 aa14.53□□□□□ -0.08
CDK5-201ENST00000297518 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
CDK5-201ENST00000297518 TGFBRAP1Q8WUH2 860 aa14.53□□□□□ -0.08
CDK5-201ENST00000297518 GCC1Q96CN9 775 aa14.53□□□□□ -0.08
CDK5-201ENST00000297518 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
CDK5-201ENST00000297518 ZNF532Q9HCE3 1301 aa14.52□□□□□ -0.08
CDK5-201ENST00000297518 PHF20L1A8MW92 1017 aa14.52□□□□□ -0.09
CDK5-201ENST00000297518 NOL9Q5SY16 702 aaKnown RBP14.52□□□□□ -0.09
CDK5-201ENST00000297518 MAPKAPK5Q8IW41 473 aa14.52□□□□□ -0.09
CDK5-201ENST00000297518 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK5-201ENST00000297518 DHX36Q9H2U1 1008 aaKnown RBP14.52□□□□□ -0.09
CDK5-201ENST00000297518 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
CDK5-201ENST00000297518 SIPA1L1O43166 1804 aa14.52□□□□□ -0.09
CDK5-201ENST00000297518 MYH1P12882 1939 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 DOCK1Q14185 1865 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 TTC41PQ6P2S7 1318 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 MAGEB6P1A0A0J9YX57 407 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 TCRBV5S4A2TA0A5A2 114 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 TBC1D12O60347 775 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 GTF2A2P52657 109 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 PPIL2Q13356 520 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 ANKRD45Q5TZF3 282 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 TSHZ3Q63HK5 1081 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 MS4A4AQ96JQ5 239 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 RIOK1Q9BRS2 568 aaKnown RBP14.51□□□□□ -0.09
CDK5-201ENST00000297518 RWDD1Q9H446 243 aaPredicted RBP14.51□□□□□ -0.09
CDK5-201ENST00000297518 CASP8AP2Q9UKL3 1982 aa14.51□□□□□ -0.09
CDK5-201ENST00000297518 TESPA1A2RU30 521 aaPredicted RBP14.5□□□□□ -0.09
CDK5-201ENST00000297518 IGF2BP3O00425 579 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDK5-201ENST00000297518 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 SLURP2P0DP57 97 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 ADD2P35612 726 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 USP5P45974 858 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 PPATQ06203 517 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 TNS4Q8IZW8 715 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 OTUD7AQ8TE49 926 aaPredicted RBP14.5□□□□□ -0.09
CDK5-201ENST00000297518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDK5-201ENST00000297518 HERC5Q9UII4 1024 aaKnown RBP14.5□□□□□ -0.09
CDK5-201ENST00000297518 NAV1Q8NEY1 1877 aa14.5□□□□□ -0.09
CDK5-201ENST00000297518 DDX60LQ5H9U9 1706 aaKnown RBP14.49□□□□□ -0.09
CDK5-201ENST00000297518 CCL15-CCL14A0A0B4J2E2 113 aa14.49□□□□□ -0.09
CDK5-201ENST00000297518 FAM196BA6NMK8 535 aa14.49□□□□□ -0.09
CDK5-201ENST00000297518 ERC2O15083 957 aa14.49□□□□□ -0.09
CDK5-201ENST00000297518 CTNND1O60716 968 aaKnown RBP14.49□□□□□ -0.09
CDK5-201ENST00000297518 TBC1D8O95759 1140 aa14.49□□□□□ -0.09
CDK5-201ENST00000297518 MX1P20591 662 aa14.49□□□□□ -0.09
CDK5-201ENST00000297518 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms