RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 HNRNPRO43390 633 aaKnown RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 NOP2P46087 812 aaKnown RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TRIM58Q8NG06 486 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 SERPINI1Q99574 410 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 UBAC1Q9BSL1 405 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 PTPRCP08575 1304 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 AMPHP49418 695 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 KIFAP3Q92845 792 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 ARHGAP31Q2M1Z3 1444 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 THAP12O43422 761 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 WDHD1O75717 1129 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 SLC38A10Q9HBR0 1119 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TTC41PQ6P2S7 1318 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 N4BP3O15049 544 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 FOXP2O15409 715 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 PHEXP78562 749 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 OCA2Q04671 838 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TADA2BQ86TJ2 420 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 PNMA8AQ86V59 439 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 CAPS2Q9BXY5 557 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TDRD12Q587J7 1177 aaKnown RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 ZMYND8Q9ULU4 1186 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 NR1H3Q13133 447 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 KIRREL3Q8IZU9 778 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 CCDC63Q8NA47 563 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 ERMNQ8TAM6 284 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 NESP48681 1621 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 A0A0G2JS52 829 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 FRA10AC1Q70Z53 315 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 KIF1BPQ96EK5 621 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 ZNF830Q96NB3 372 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 KRT3P12035 628 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 TBC1D23Q9NUY8 699 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 ARHGAP26Q9UNA1 814 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 EIF4G1Q04637 1599 aaKnown RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 KIF26BQ2KJY2 2108 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 SART1O43290 800 aaKnown RBP5.38□□□□□ -1.55
CSMD3-201ENST00000297405 CCDC159P0C7I6 412 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 IQCA1Q86XH1 822 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 SESN1Q9Y6P5 492 aa5.38□□□□□ -1.55
CSMD3-201ENST00000297405 MTIF2P46199 727 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 SLC8A3P57103 927 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 PPP1R2P3Q6NXS1 205 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TPCN1Q9ULQ1 816 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 ZMYM4Q5VZL5 1548 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 DOCK7Q96N67 2140 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 SYKP43405 635 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TYRO3Q06418 890 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 PLCB4Q15147 1175 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 MPNDQ8N594 471 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 FERMT2Q96AC1 680 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TBC1D2Q9BYX2 928 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 RIPOR2Q9Y4F9 1068 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 KIF14Q15058 1648 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 PHLPP2Q6ZVD8 1323 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 RIPK4P57078 832 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 MUM1L1Q5H9M0 696 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 SNX29Q8TEQ0 813 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 PANK3Q9H999 370 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 DCDC2Q9UHG0 476 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 UNC13AQ9UPW8 1703 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 MCF2LO15068 1137 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 ZSCAN22P10073 491 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TMED10P49755 219 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 NOX5Q96PH1 765 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TRERF1Q96PN7 1200 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 KCNG1Q9UIX4 513 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 DCTN3O75935 186 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 ACBD5Q5T8D3 534 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 LLPHQ9BRT6 129 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 PTPN23Q9H3S7 1636 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 ZNF189O75820 626 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 TEDDM1Q5T9Z0 273 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 CAPRIN2Q6IMN6 1127 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 AKR1B15C9JRZ8 316 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 STK10O94804 968 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 HNRNPCP07910 306 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 KRT7P08729 469 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 USP33Q8TEY7 942 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 CACYBPQ9HB71 228 aaKnown RBP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 FRMD4BQ9Y2L6 1034 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 EID1Q9Y6B2 187 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 MAP3K7O43318 606 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 SERPINB2P05120 415 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 CALML3P27482 149 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 BIRC3Q13489 604 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 C16orf87Q6PH81 154 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 CCDC197Q8NCU1 140 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD3-201ENST00000297405 BAIAP2L1Q9UHR4 511 aa5.37□□□□□ -1.55
CSMD3-201ENST00000297405 ST20-MTHFSA0A0A6YYL1 179 aa5.36□□□□□ -1.55
CSMD3-201ENST00000297405 ARHGAP42A6NI28 874 aa5.36□□□□□ -1.55
CSMD3-201ENST00000297405 FGD6Q6ZV73 1430 aa5.36□□□□□ -1.55
CSMD3-201ENST00000297405 LRRC9Q6ZRR7 1453 aa5.36□□□□□ -1.55
CSMD3-201ENST00000297405 PRPF6O94906 941 aaKnown RBP5.36□□□□□ -1.55
CSMD3-201ENST00000297405 MRPS35P82673 323 aaKnown RBP5.36□□□□□ -1.55
CSMD3-201ENST00000297405 NONOQ15233 471 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSMD3-201ENST00000297405 NDUFA5Q16718 116 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms