RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
PRDM9-201ENST00000296682 RIMBP2O15034 1052 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 CDC27P30260 824 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 KRT40Q6A162 431 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 SAMD1Q6SPF0 538 aaPredicted RBP10.79□□□□□ -0.68
PRDM9-201ENST00000296682 PCDHA7Q9UN72 937 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 FDPSP14324 419 aaKnown RBP10.79□□□□□ -0.68
PRDM9-201ENST00000296682 FAM200AQ8TCP9 573 aa10.79□□□□□ -0.68
PRDM9-201ENST00000296682 ZNF274Q96GC6 653 aaPredicted RBP10.79□□□□□ -0.68
PRDM9-201ENST00000296682 BAZ2BQ9UIF8 2168 aaKnown RBP10.79□□□□□ -0.68
PRDM9-201ENST00000296682 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 BTBD18B2RXH4 712 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 RGL2O15211 777 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 ATP2B2Q01814 1243 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 RTN1Q16799 776 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 SAP30BPQ9UHR5 308 aaKnown RBP10.78□□□□□ -0.68
PRDM9-201ENST00000296682 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 LRMPQ12912 555 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 AKNAD1Q5T1N1 836 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 APOA5Q6Q788 366 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 RBM43Q6ZSC3 357 aaKnown RBP10.78□□□□□ -0.68
PRDM9-201ENST00000296682 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 TRMT1Q9NXH9 659 aaKnown RBP10.78□□□□□ -0.68
PRDM9-201ENST00000296682 MCM9Q9NXL9 1143 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 MYH14Q7Z406 1995 aaKnown RBP10.78□□□□□ -0.68
PRDM9-201ENST00000296682 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 TSPY2A6NKD2 308 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 NDUFA8P51970 172 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 MRVI1Q9Y6F6 885 aa10.78□□□□□ -0.68
PRDM9-201ENST00000296682 LAMB1P07942 1786 aa10.77□□□□□ -0.68
PRDM9-201ENST00000296682 CDKL5O76039 1030 aa10.77□□□□□ -0.68
PRDM9-201ENST00000296682 PRDX5P30044 214 aa10.77□□□□□ -0.68
PRDM9-201ENST00000296682 UBE3CQ15386 1083 aa10.77□□□□□ -0.68
PRDM9-201ENST00000296682 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.68
PRDM9-201ENST00000296682 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.68
PRDM9-201ENST00000296682 LLPHQ9BRT6 129 aaKnown RBP10.77□□□□□ -0.68
PRDM9-201ENST00000296682 GOLPH3LQ9H4A5 285 aa10.77□□□□□ -0.68
PRDM9-201ENST00000296682 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.68
PRDM9-201ENST00000296682 RTL9Q8NET4 1388 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 NMT2O60551 498 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 MKNK2Q9HBH9 465 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 CLIP2Q9UDT6 1046 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 LMOD1P29536 600 aaPredicted RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 EVX2Q03828 476 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 KLHL10Q6JEL2 608 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 NOL10Q9BSC4 688 aaKnown RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
PRDM9-201ENST00000296682 CABP5Q9NP86 173 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 VPS54Q9P1Q0 977 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 MINPP1Q9UNW1 487 aa10.77□□□□□ -0.69
PRDM9-201ENST00000296682 NID2Q14112 1375 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 WDR19Q8NEZ3 1342 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 GSG1L2A8MUP6 293 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 GUCY1A2P33402 732 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 NR5A1Q13285 461 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 IFIT1BQ5T764 474 aaKnown RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 STAMQ92783 540 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 RPGRQ92834 1020 aaKnown RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 C16orf45Q96MC5 204 aaPredicted RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 SBF2Q86WG5 1849 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 FOXP2O15409 715 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 UQCRHP07919 91 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 CYP2D6P10635 497 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 CDK11BP21127 795 aaKnown RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 C11orf57Q6ZUT1 292 aaPredicted RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 ADGRA1Q86SQ6 560 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 AP5Z1O43299 807 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 NTSR2O95665 410 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 PPARAQ07869 468 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 ANO1Q5XXA6 986 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 TXNRD3Q86VQ6 643 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
PRDM9-201ENST00000296682 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
PRDM9-201ENST00000296682 SYKP43405 635 aa10.75□□□□□ -0.69
PRDM9-201ENST00000296682 HOMER1Q86YM7 354 aa10.75□□□□□ -0.69
PRDM9-201ENST00000296682 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
PRDM9-201ENST00000296682 ESR2Q92731 530 aa10.75□□□□□ -0.69
PRDM9-201ENST00000296682 KRT23Q9C075 422 aa10.75□□□□□ -0.69
PRDM9-201ENST00000296682 ZMYM6O95789 1325 aa10.75□□□□□ -0.69
PRDM9-201ENST00000296682 AFMP43652 599 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms