RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 LRP2BPQ9P2M1 347 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 CARMIL3Q8ND23 1372 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 KLF18A0A0U1RQI7 1052 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 GNPATO15228 680 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 TBC1D12O60347 775 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 RPS8P62241 208 aaKnown RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 IFNL3Q8IZI9 196 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 KRT23Q9C075 422 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 NAPBQ9H115 298 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 DENND2AQ9ULE3 1009 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 ANGEL1Q9UNK9 670 aaKnown RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 MINPP1Q9UNW1 487 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 PDS5AQ29RF7 1337 aaKnown RBP10.83□□□□□ -0.68
CLRN1-201ENST00000295911 IGSF3O75054 1194 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 CDKL5O76039 1030 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 MBD4O95243 580 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 PBX2P40425 430 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 ANTXR2P58335 489 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 CPLX2Q6PUV4 134 aaKnown RBP10.83□□□□□ -0.68
CLRN1-201ENST00000295911 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 TTC6Q86TZ1 520 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 LEO1Q8WVC0 666 aaPredicted RBP10.83□□□□□ -0.68
CLRN1-201ENST00000295911 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
CLRN1-201ENST00000295911 KIAA1551Q9HCM1 1747 aa10.83□□□□□ -0.68
CLRN1-201ENST00000295911 CACNA1SQ13698 1873 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 GOLGA8BA8MQT2 603 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 CPLX1O14810 134 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 RFC4P35249 363 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 HS1BP3Q53T59 392 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 TRAPPC3LQ5T215 181 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 ARHGEF1Q92888 912 aaKnown RBP10.82□□□□□ -0.68
CLRN1-201ENST00000295911 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 RNF41Q9H4P4 317 aaPredicted RBP10.82□□□□□ -0.68
CLRN1-201ENST00000295911 NCOA5Q9HCD5 579 aaKnown RBP10.82□□□□□ -0.68
CLRN1-201ENST00000295911 TFIP11Q9UBB9 837 aaKnown RBP10.82□□□□□ -0.68
CLRN1-201ENST00000295911 TRPC5Q9UL62 973 aaPredicted RBP10.82□□□□□ -0.68
CLRN1-201ENST00000295911 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 MYH6P13533 1939 aa10.82□□□□□ -0.68
CLRN1-201ENST00000295911 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
CLRN1-201ENST00000295911 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 SNAP23O00161 211 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
CLRN1-201ENST00000295911 DTNBO60941 627 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 LIFRP42702 1097 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 KCNQ4P56696 695 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 SART3Q15020 963 aaKnown RBP10.81□□□□□ -0.68
CLRN1-201ENST00000295911 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 MFSD6Q6ZSS7 791 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 PTF1AQ7RTS3 328 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 FBXO33Q7Z6M2 555 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 DDX19AQ9NUU7 478 aaKnown RBP10.81□□□□□ -0.68
CLRN1-201ENST00000295911 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 SLC4A4Q9Y6R1 1079 aa10.81□□□□□ -0.68
CLRN1-201ENST00000295911 COL4A1P02462 1669 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 ECM29Q5VYK3 1845 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 MAGEB6P1A0A0J9YX57 407 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 CYP7A1P22680 504 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 GYG1P46976 350 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 TDO2P48775 406 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 SYNE3Q6ZMZ3 975 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 SGMS1Q86VZ5 419 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 IGDCC4Q8TDY8 1250 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 STAG1Q8WVM7 1258 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
CLRN1-201ENST00000295911 PDLIM2Q96JY6 352 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 C8orf76Q96K31 380 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 FAM84BQ96KN1 310 aaPredicted RBP10.8□□□□□ -0.68
CLRN1-201ENST00000295911 NUP62CLQ9H1M0 184 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 RAI14Q9P0K7 980 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 ORC3Q9UBD5 711 aaPredicted RBP10.8□□□□□ -0.68
CLRN1-201ENST00000295911 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
CLRN1-201ENST00000295911 RCOR1Q9UKL0 485 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 BAZ2AQ9UIF9 1905 aaKnown RBP10.8□□□□□ -0.68
CLRN1-201ENST00000295911 MYH2Q9UKX2 1941 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 AFF2P51816 1311 aa10.8□□□□□ -0.68
CLRN1-201ENST00000295911 B4E1Z4 1266 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 NPHP1O15259 732 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 ZBTB43O43298 467 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 CCDC192P0DO97 292 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 PCP11498 1178 aaKnown RBP10.79□□□□□ -0.68
CLRN1-201ENST00000295911 FDPSP14324 419 aaKnown RBP10.79□□□□□ -0.68
CLRN1-201ENST00000295911 METAP2P50579 478 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLRN1-201ENST00000295911 MAP3K11Q16584 847 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 TMEM67Q5HYA8 995 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
CLRN1-201ENST00000295911 NFXL1Q6ZNB6 911 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms