RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 FPGT-TNNI3KV9GXZ4 949 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 CA12O43570 354 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 MS4A1P11836 297 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 MCAMP43121 646 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 NFIAQ12857 509 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 CDC42EP5Q6NZY7 148 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 SLC10A4Q96EP9 437 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 WNK4Q96J92 1243 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 TEPSINQ96N21 525 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 TMEM121BQ9BXQ6 578 aaPredicted RBP12.02□□□□□ -0.49
CCDC58-201ENST00000291458 CCDC8Q9H0W5 538 aaPredicted RBP12.02□□□□□ -0.49
CCDC58-201ENST00000291458 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
CCDC58-201ENST00000291458 USP2O75604 605 aaPredicted RBP12.01□□□□□ -0.49
CCDC58-201ENST00000291458 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 BTDP43251 543 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 PICALMQ13492 652 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 LDLRAD1Q5T700 205 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
CCDC58-201ENST00000291458 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 SALL1Q9NSC2 1324 aa12.01□□□□□ -0.49
CCDC58-201ENST00000291458 PCNTO95613 3336 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 ARID4AP29374 1257 aaPredicted RBP12□□□□□ -0.49
CCDC58-201ENST00000291458 GJA5P36382 358 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 MECOMQ03112 1051 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 AACSQ86V21 672 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 OPTNQ96CV9 577 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 OTUD5Q96G74 571 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 WRNIP1Q96S55 665 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 NDUFB9Q9Y6M9 179 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
CCDC58-201ENST00000291458 UQCRFS1P1P0C7P4 283 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 RGS3P49796 1198 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 DGKZQ13574 1117 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 VGLL4Q14135 290 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 CCDC158Q5M9N0 1113 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
CCDC58-201ENST00000291458 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
CCDC58-201ENST00000291458 ZFPM1Q8IX07 1006 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 ANKRD13AQ8IZ07 590 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
CCDC58-201ENST00000291458 CSADQ9Y600 493 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
CCDC58-201ENST00000291458 LAMB1P07942 1786 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 CDK5RAP2Q96SN8 1893 aa11.99□□□□□ -0.49
CCDC58-201ENST00000291458 PDS5AQ29RF7 1337 aaKnown RBP11.98□□□□□ -0.49
CCDC58-201ENST00000291458 SLURP2P0DP57 97 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 ZAP70P43403 619 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 DCAF15Q66K64 600 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 FAM83AQ86UY5 434 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
CCDC58-201ENST00000291458 ZKSCAN4Q969J2 545 aaPredicted RBP11.98□□□□□ -0.49
CCDC58-201ENST00000291458 EAF2Q96CJ1 260 aaPredicted RBP11.98□□□□□ -0.49
CCDC58-201ENST00000291458 SAGE1Q9NXZ1 904 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 FAM198AQ9UFP1 575 aa11.98□□□□□ -0.49
CCDC58-201ENST00000291458 GAKO14976 1311 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 INPP5BP32019 993 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
CCDC58-201ENST00000291458 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.498e-9■■□□□ 12.6
CCDC58-201ENST00000291458 ZNF384Q8TF68 577 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 MRIQ9BWK5 157 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 MCOLN1Q9GZU1 580 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
CCDC58-201ENST00000291458 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
CCDC58-201ENST00000291458 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
CCDC58-201ENST00000291458 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 DOCK1Q14185 1865 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 HMMRO75330 724 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 GSTO1P78417 241 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 FAM151AQ8WW52 585 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 NSUN4Q96CB9 384 aaKnown RBP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 NOL10Q9BSC4 688 aaKnown RBP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 R3HDMLQ9H3Y0 253 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
CCDC58-201ENST00000291458 PIH1D3Q9NQM4 214 aaKnown RBP11.96□□□□□ -0.49
CCDC58-201ENST00000291458 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms