RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 SYT10Q6XYQ8 523 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 RNF216Q9NWF9 866 aaPredicted RBP20.73■□□□□ 0.91
SIM2-201ENST00000290399 CCDC175P0C221 793 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 KRT79Q5XKE5 535 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 WDR66Q8TBY9 1149 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 JADE2Q9NQC1 790 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 VPS54Q9P1Q0 977 aa20.73■□□□□ 0.91
SIM2-201ENST00000290399 NEXMIFQ5QGS0 1516 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 USP31Q70CQ4 1352 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 MYO1BO43795 1136 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 CAMSAP1Q5T5Y3 1602 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
SIM2-201ENST00000290399 MATR3P43243 847 aaKnown RBP eCLIP20.72■□□□□ 0.91
SIM2-201ENST00000290399 FANCCQ00597 558 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 PPARAQ07869 468 aa20.72■□□□□ 0.91
SIM2-201ENST00000290399 KARSQ15046 597 aaKnown RBP20.72■□□□□ 0.91
SIM2-201ENST00000290399 MAP9Q49MG5 647 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 LZTFL1Q9NQ48 299 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 MAPK8IP1Q9UQF2 711 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 SAMM50Q9Y512 469 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 IL6STP40189 918 aaPredicted RBP20.71■□□□□ 0.91
SIM2-201ENST00000290399 UBE3CQ15386 1083 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 FAM47AQ5JRC9 791 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 TTC38Q5R3I4 469 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 OSBP2Q969R2 916 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 MMRN2Q9H8L6 949 aa20.71■□□□□ 0.91
SIM2-201ENST00000290399 CYLC1P35663 651 aaPredicted RBP20.7■□□□□ 0.9
SIM2-201ENST00000290399 PPP2R5BQ15173 497 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 ERMNQ8TAM6 284 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 EIF6P56537 245 aaKnown RBP20.7■□□□□ 0.9
SIM2-201ENST00000290399 OGFOD1Q8N543 542 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 EHMT1Q9H9B1 1298 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 TBCAO75347 108 aaKnown RBP20.7■□□□□ 0.9
SIM2-201ENST00000290399 PIGBQ92521 554 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 TSPYL1Q9H0U9 437 aa20.7■□□□□ 0.9
SIM2-201ENST00000290399 CCT6AP40227 531 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 TFAP4Q01664 338 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 UBXN1Q04323 297 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 CHRNDQ07001 517 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 TAF3Q5VWG9 929 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 ALS2CR12Q96Q35 445 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 SPAG5Q96R06 1193 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 KIAA1468Q9P260 1216 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 NFE2L3Q9Y4A8 694 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 RDXP35241 583 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 CRKLP46109 303 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 STAMQ92783 540 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 GGA1Q9UJY5 639 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 H7C1W4 665 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 NOP2P46087 812 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 NLRP12P59046 1061 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 NSUN7Q8NE18 718 aaKnown RBP20.69■□□□□ 0.9
SIM2-201ENST00000290399 PCDHA7Q9UN72 937 aa20.69■□□□□ 0.9
SIM2-201ENST00000290399 PFKFB1P16118 471 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 MAPKAPK5Q8IW41 473 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 KIF2CQ99661 725 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 WWC2Q6AWC2 1192 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 BAG1Q99933 345 aaPredicted RBP20.68■□□□□ 0.9
SIM2-201ENST00000290399 SEC31BQ9NQW1 1179 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
SIM2-201ENST00000290399 SPATA31A3Q5VYP0 1347 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 SYCP3Q8IZU3 236 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 FANCBQ8NB91 859 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 ATG3Q9NT62 314 aa20.68■□□□□ 0.9
SIM2-201ENST00000290399 M0R2C6 588 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 RBM17Q96I25 401 aaKnown RBP20.67■□□□□ 0.9
SIM2-201ENST00000290399 GPCPD1Q9NPB8 672 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 USP8P40818 1118 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 CRB1P82279 1406 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 DRC1Q96MC2 740 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 TNKSO95271 1327 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 SSR1P43307 286 aaKnown RBP20.67■□□□□ 0.9
SIM2-201ENST00000290399 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 TMCO5BA8MYB1 307 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 PUS7LQ9H0K6 701 aaKnown RBP20.67■□□□□ 0.9
SIM2-201ENST00000290399 VPS16Q9H269 839 aa20.67■□□□□ 0.9
SIM2-201ENST00000290399 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 CDC42BPGQ6DT37 1551 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 CPS1P31327 1500 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 TUBB4AP04350 444 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 POSTNQ15063 836 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 EHBP1Q8NDI1 1231 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 LUC7L2Q9Y383 392 aaKnown RBP20.66■□□□□ 0.9
SIM2-201ENST00000290399 SPDYE3A6NKU9 549 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 MCM3P25205 808 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 CETN1Q12798 172 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 PRM3Q9NNZ6 103 aa20.66■□□□□ 0.9
SIM2-201ENST00000290399 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms