RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
CCDC144B-201ENST00000285176 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 HMGB1P09429 215 aaKnown RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 STK38Q15208 465 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SASS6Q6UVJ0 657 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 CDC37L1Q7L3B6 337 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 CATIPQ7Z7H3 387 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 ZNF408Q9H9D4 720 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 PARP4Q9UKK3 1724 aaKnown RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SPATA32Q96LK8 384 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 TDRD3Q9H7E2 651 aaKnown RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 PCDHAC2Q9Y5I4 1007 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 ISM2Q6H9L7 571 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SH2B1Q9NRF2 756 aaPredicted RBP10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 ZSWIM5Q9P217 1185 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SCN11AQ9UI33 1791 aa10.51□□□□□ -0.73
CCDC144B-201ENST00000285176 SRGNP10124 158 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 MARCKSP29966 332 aaPredicted RBP10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 UBE3CQ15386 1083 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 GPR162Q16538 588 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 NIM1KQ8IY84 436 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 LRRC47Q8N1G4 583 aaKnown RBP10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 DSCC1Q9BVC3 393 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 SYCE3A1L190 88 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 MBD3O95983 291 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 GSTO1P78417 241 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 FEZ1Q99689 392 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 ALG1Q9BT22 464 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 NEDD4P46934 1319 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 GDF11O95390 407 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 RTN1Q16799 776 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 SPICE1Q8N0Z3 855 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 PDILTQ8N807 584 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
CCDC144B-201ENST00000285176 PLSCR1O15162 318 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 ECE2O60344 883 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 C5P01031 1676 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 SCRN1Q12765 414 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 VGLL2Q8N8G2 317 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 CTDP1Q9Y5B0 961 aaPredicted RBP10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 TNKSO95271 1327 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 DOT1LQ8TEK3 1739 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 HLA-DOAP06340 250 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 KRT85P78386 507 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 UBE2Q2LH0YL09 131 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 DHX8Q14562 1220 aaKnown RBP10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 CYB5R4Q7L1T6 521 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 ERCC4Q92889 916 aaPredicted RBP10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 KRT23Q9C075 422 aa10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 V9GY48 417 aaPredicted RBP10.49□□□□□ -0.73
CCDC144B-201ENST00000285176 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 SSRP1Q08945 709 aaKnown RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 TBC1D10BQ4KMP7 808 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 DALRD3Q5D0E6 543 aaKnown RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 HEATR3Q7Z4Q2 680 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 NSUN4Q96CB9 384 aaKnown RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 FRMPD2Q68DX3 1309 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 GNAT2P19087 354 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 FGFR2P21802 821 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 ARID4AP29374 1257 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 CCDC84Q86UT8 332 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 UBA5Q9GZZ9 404 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 PIM2Q9P1W9 311 aa10.48□□□□□ -0.73
CCDC144B-201ENST00000285176 ZSCAN22P10073 491 aaPredicted RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 ATP6V0A2Q9Y487 856 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 EAPPQ56P03 285 aaPredicted RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 ATRNO75882 1429 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 GADD45BO75293 160 aaPredicted RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 HMGB2P26583 209 aaKnown RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 NLRP5P59047 1200 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 TOB2Q14106 344 aaPredicted RBP10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 WDR78Q5VTH9 848 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 USP48Q86UV5 1035 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 IL27Q8NEV9 243 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 CLIP2Q9UDT6 1046 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 MYO1BO43795 1136 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 ZNF592Q92610 1267 aa10.47□□□□□ -0.73
CCDC144B-201ENST00000285176 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms