RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PBX2P40425 430 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 PDE4BQ07343 736 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 CLN3Q13286 438 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 LRRC14Q15048 493 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 BTN2A2Q8WVV5 523 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 JPH3Q8WXH2 748 aaPredicted RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 QTRT2Q9H974 415 aaKnown RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 MYBL2P10244 700 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 MAMSTRQ6ZN01 415 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 EP400NLQ6ZTU2 488 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 USP20Q9Y2K6 914 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 LUC7L2Q9Y383 392 aaKnown RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 CEP83Q9Y592 693 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 PCNX4Q63HM2 1172 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 HGSNATQ68CP4 663 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 ZNF784Q8NCA9 323 aaPredicted RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 DHRS1Q96LJ7 313 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 ZFYVE28Q9HCC9 887 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 TLR6Q9Y2C9 796 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 VARSP26640 1264 aaKnown RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 STAT3P40763 770 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 OCRLQ01968 901 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 PPP1R26Q5T8A7 1209 aaPredicted RBP3.33□□□□□ -1.88
CHD1-201ENST00000284049 FBXL19Q6PCT2 694 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 FAM169BQ8N8A8 192 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 WASHC2AQ641Q2 1341 aa3.33□□□□□ -1.88
CHD1-201ENST00000284049 FYCO1Q9BQS8 1478 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 KIAA1211LQ6NV74 962 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 CHMP4CQ96CF2 233 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 LTV1Q96GA3 475 aaPredicted RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 ESYT1Q9BSJ8 1104 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 TMEM39AQ9NV64 488 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 WASF2Q9Y6W5 498 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ABCA9Q8IUA7 1624 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 PHLDB1Q86UU1 1377 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 hCG_1642624A0A1W2PR95 340 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 DIAPH1O60610 1272 aaKnown RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 RAPGEF3O95398 923 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 CELA3AP09093 270 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 PYGMP11217 842 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 SCNN1DP51172 638 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 IL2P60568 153 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 STK3Q13188 491 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 DDX10Q13206 875 aaKnown RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 ALFQ53S48 1182 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 C2orf27AQ580R0 203 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 VARS2Q5ST30 1063 aaKnown RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 PGM2L1Q6PCE3 622 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 LRRC69Q6ZNQ3 347 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ZSCAN1Q8NBB4 408 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ST13P5Q8NFI4 369 aaPredicted RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 WNK4Q96J92 1243 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 MAST1Q9Y2H9 1570 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 JMJD7P0C870 316 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 POU5F1Q01860 360 aaKnown RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 BBS9Q3SYG4 887 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 FAM196AQ6ZSG2 479 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 WNT2BQ93097 391 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 EVI5LQ96CN4 794 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 MAF1Q9H063 256 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 DMTF1Q9Y222 760 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 SLC12A7Q9Y666 1083 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 IFRD1O00458 451 aaPredicted RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 NOL9Q5SY16 702 aaKnown RBP3.32□□□□□ -1.88
CHD1-201ENST00000284049 ANKRD13DQ6ZTN6 518 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 REC114Q7Z4M0 266 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 DRC7Q8IY82 874 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ANP32EQ9BTT0 268 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 MAN1C1Q9NR34 630 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 COPB2P35606 906 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 CRKP46108 304 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 MMP16P51512 607 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ERMP1Q7Z2K6 904 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 USP33Q8TEY7 942 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ROBO2Q9HCK4 1378 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 ZMYM4Q5VZL5 1548 aa3.32□□□□□ -1.88
CHD1-201ENST00000284049 TEAD4Q15561 434 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 TTC6Q86TZ1 520 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 STAG2Q8N3U4 1231 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 MSL3Q8N5Y2 521 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 TPX2Q9ULW0 747 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 RAD54L2Q9Y4B4 1467 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 CDK2AP1O14519 115 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 EREGO14944 169 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 NUCB1Q02818 461 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 MICALL1Q8N3F8 863 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ZBTB38Q8NAP3 1195 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 PUS7LQ9H0K6 701 aaKnown RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 KANSL2Q9H9L4 492 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 B2RBV5 119 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 ZNF500O60304 480 aaPredicted RBP3.31□□□□□ -1.88
CHD1-201ENST00000284049 MAPK9P45984 424 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 BCAMP50895 628 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 PTPN5P54829 565 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 GRM2Q14416 872 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 SAFBQ15424 915 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD1-201ENST00000284049 IL31Q6EBC2 164 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 TTLL7Q6ZT98 887 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 FCHSD1Q86WN1 690 aa3.31□□□□□ -1.88
CHD1-201ENST00000284049 DGKHQ86XP1 1220 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms