RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
RPS3-201ENST00000278572 PI16Q6UXB8 463 aa18.19■□□□□ 0.5
RPS3-201ENST00000278572 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
RPS3-201ENST00000278572 PICK1Q9NRD5 415 aa18.19■□□□□ 0.5
RPS3-201ENST00000278572 SURF6O75683 361 aaKnown RBP18.18■□□□□ 0.5
RPS3-201ENST00000278572 MCAMP43121 646 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 TNNI3KQ59H18 835 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 TTC39AQ5SRH9 613 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 ANKRD23Q86SG2 305 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
RPS3-201ENST00000278572 FPGT-TNNI3KV9GXZ4 949 aa18.18■□□□□ 0.5
RPS3-201ENST00000278572 CXCL11O14625 94 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
RPS3-201ENST00000278572 RHBDL3P58872 404 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 KIF22Q14807 665 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
RPS3-201ENST00000278572 LRP2BPQ9P2M1 347 aa18.17■□□□□ 0.5
RPS3-201ENST00000278572 DDTLA6NHG4 134 aaPredicted RBP18.16■□□□□ 0.5
RPS3-201ENST00000278572 PHF20L1A8MW92 1017 aa18.16■□□□□ 0.5
RPS3-201ENST00000278572 ZBTB7BO15156 539 aaPredicted RBP18.16■□□□□ 0.5
RPS3-201ENST00000278572 RLBP1P12271 317 aa18.16■□□□□ 0.5
RPS3-201ENST00000278572 ARMC5Q96C12 935 aa18.16■□□□□ 0.5
RPS3-201ENST00000278572 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
RPS3-201ENST00000278572 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
RPS3-201ENST00000278572 PDHXO00330 501 aa18.15■□□□□ 0.5
RPS3-201ENST00000278572 CTNND1O60716 968 aaKnown RBP18.15■□□□□ 0.5
RPS3-201ENST00000278572 LACTBP83111 547 aaPredicted RBP18.15■□□□□ 0.5
RPS3-201ENST00000278572 MAP3K10Q02779 954 aa18.15■□□□□ 0.5
RPS3-201ENST00000278572 PARK7Q99497 189 aaKnown RBP18.15■□□□□ 0.5
RPS3-201ENST00000278572 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
RPS3-201ENST00000278572 TNRC18O15417 2968 aaPredicted RBP18.15■□□□□ 0.5
RPS3-201ENST00000278572 COL2A1P02458 1487 aaPredicted RBP18.14■□□□□ 0.5
RPS3-201ENST00000278572 IGSF3O75054 1194 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 GNRH1P01148 92 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 MS4A1P11836 297 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 PTPRAP18433 802 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 CAP1Q01518 475 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
RPS3-201ENST00000278572 ZHX2Q9Y6X8 837 aa18.14■□□□□ 0.49
RPS3-201ENST00000278572 TBC1D12O60347 775 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 BAG3O95817 575 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 PLCG2P16885 1265 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 MOGSQ13724 837 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 SLC9C1Q4G0N8 1177 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 NAA16Q6N069 864 aaPredicted RBP18.13■□□□□ 0.49
RPS3-201ENST00000278572 CEP85Q6P2H3 762 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 C17orf99Q6UX52 265 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
RPS3-201ENST00000278572 TEX11Q8IYF3 940 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 OSBPL5Q9H0X9 879 aaPredicted RBP18.13■□□□□ 0.49
RPS3-201ENST00000278572 SNRKQ9NRH2 765 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 PTCH2Q9Y6C5 1203 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 MYH2Q9UKX2 1941 aa18.13■□□□□ 0.49
RPS3-201ENST00000278572 A0A0G2JLL6 359 aaPredicted RBP18.12■□□□□ 0.49
RPS3-201ENST00000278572 PRMT2P55345 433 aa18.12■□□□□ 0.49
RPS3-201ENST00000278572 PRRT2Q7Z6L0 340 aaPredicted RBP18.12■□□□□ 0.49
RPS3-201ENST00000278572 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
RPS3-201ENST00000278572 ERC1Q8IUD2 1116 aa18.12■□□□□ 0.49
RPS3-201ENST00000278572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPS3-201ENST00000278572 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
RPS3-201ENST00000278572 DOCK2Q92608 1830 aa18.12■□□□□ 0.49
RPS3-201ENST00000278572 CENPFP49454 3210 aa18.11■□□□□ 0.49
RPS3-201ENST00000278572 PRPF38BQ5VTL8 546 aaKnown RBP18.11■□□□□ 0.49
RPS3-201ENST00000278572 ZNF333Q96JL9 665 aa18.11■□□□□ 0.49
RPS3-201ENST00000278572 DBNLQ9UJU6 430 aaKnown RBP18.11■□□□□ 0.49
RPS3-201ENST00000278572 AFG3L2Q9Y4W6 797 aa18.11■□□□□ 0.49
RPS3-201ENST00000278572 ADGRA2Q96PE1 1338 aa18.11■□□□□ 0.49
RPS3-201ENST00000278572 PANK1Q8TE04 598 aa18.1■□□□□ 0.49
RPS3-201ENST00000278572 TMEM106CQ9BVX2 250 aa18.1■□□□□ 0.49
RPS3-201ENST00000278572 ARHGAP39Q9C0H5 1083 aa18.1■□□□□ 0.49
RPS3-201ENST00000278572 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■■■■ 33.7
RPS3-201ENST00000278572 SLC45A1Q9Y2W3 748 aa18.1■□□□□ 0.49
RPS3-201ENST00000278572 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 TRIM75PA6NK02 468 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
RPS3-201ENST00000278572 HOXD10P28358 340 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 ZAP70P43403 619 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 HSP90AB4PQ58FF6 505 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 GPAT2Q6NUI2 795 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 GADL1Q6ZQY3 521 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 SH3RF3Q8TEJ3 882 aaPredicted RBP18.09■□□□□ 0.49
RPS3-201ENST00000278572 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
RPS3-201ENST00000278572 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
RPS3-201ENST00000278572 AK9Q5TCS8 1911 aa18.09■□□□□ 0.49
RPS3-201ENST00000278572 FAM196BA6NMK8 535 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 SLURP2P0DP57 97 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 CYP2C8P10632 490 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 PSMC4P43686 418 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 PPP4CP60510 307 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 EAF2Q96CJ1 260 aaPredicted RBP18.08■□□□□ 0.48
RPS3-201ENST00000278572 TBC1D2Q9BYX2 928 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 CCDC8Q9H0W5 538 aaPredicted RBP18.08■□□□□ 0.48
RPS3-201ENST00000278572 PI4KBQ9UBF8 816 aa18.08■□□□□ 0.48
RPS3-201ENST00000278572 HERC5Q9UII4 1024 aaKnown RBP18.08■□□□□ 0.48
RPS3-201ENST00000278572 BRCA2P51587 3418 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms