RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GPTP24298 496 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 DCAF17Q5H9S7 520 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 CCDC117Q8IWD4 279 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 KIFC2Q96AC6 838 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 MAP3K1Q13233 1512 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 PPP1R21Q6ZMI0 780 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 HOMER3Q9NSC5 361 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 ASIC3Q9UHC3 531 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 PAK1Q13153 545 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 NCAPGQ9BPX3 1015 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 WASLO00401 505 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 MAGEA1P43355 309 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 TTC16Q8NEE8 873 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 RRAGDQ9NQL2 400 aaPredicted RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 KCNH3Q9ULD8 1083 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 CCT6AP40227 531 aaKnown RBP9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 ANO1Q5XXA6 986 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 KSR2Q6VAB6 950 aa9.7□□□□□ -0.86
SCUBE3-201ENST00000274938 GRM8O00222 908 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 FLOT1O75955 427 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 SLC8A3P57103 927 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 PDE4DQ08499 809 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 RPS6KA1Q15418 735 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 DENND2CQ68D51 928 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 GLT8D2Q9H1C3 349 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CAPN7Q9Y6W3 813 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 ATP5J2-PTCD1G3V325 749 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CEP104O60308 925 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 USHBP1Q8N6Y0 703 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 PRPF31Q8WWY3 499 aaKnown RBP9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 MED4Q9NPJ6 270 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CHMLP26374 656 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 PDE1CQ14123 709 aaPredicted RBP9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 KRT71Q3SY84 523 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 DNAJC8O75937 253 aaPredicted RBP9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 DEXIO95424 95 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 A0A1B0GVL5 298 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 KRT15P19012 456 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 ERCC3P19447 782 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 STX2P32856 288 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 PSMD6Q15008 389 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CSGALNACT2Q8N6G5 542 aa9.69□□□□□ -0.86
SCUBE3-201ENST00000274938 CCDC84Q86UT8 332 aaPredicted RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 TMEM87BQ96K49 555 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 FNBP1Q96RU3 617 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 AOX1Q06278 1338 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 RASA3Q14644 834 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 LRCH2Q5VUJ6 765 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 VPS16Q9H269 839 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 FAM135AQ9P2D6 1515 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 SUPT6HQ7KZ85 1726 aaKnown RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 KRT5P13647 590 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 GNGT1P63211 74 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 CTTNBP2NLQ9P2B4 639 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 ATP8B1O43520 1251 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 PRR16Q569H4 304 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 RGS16O15492 202 aaPredicted RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 RPS6KB1P23443 525 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 RBBP5Q15291 538 aaKnown RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 SPATS2LQ9NUQ6 558 aaKnown RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 FAF1Q9UNN5 650 aaPredicted RBP9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 RIPOR2Q9Y4F9 1068 aa9.68□□□□□ -0.86
SCUBE3-201ENST00000274938 SMTNP53814 917 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 ZNF804AQ7Z570 1209 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 BANK1Q8NDB2 785 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 HAUS2Q9NVX0 235 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 VWA3AA6NCI4 1184 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 EVI5O60447 810 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 ST5P78524 1137 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 BIRC3Q13489 604 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 SNCBQ16143 134 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 KLHL7Q8IXQ5 586 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 PPP2R5BQ15173 497 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 CEP85Q6P2H3 762 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 DPH6Q7L8W6 267 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 LINS1Q8NG48 757 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 STAG1Q8WVM7 1258 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 EFCAB8A8MWE9 144 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 DKC1O60832 514 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 GSDMBQ8TAX9 411 aa9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
SCUBE3-201ENST00000274938 KRT9P35527 623 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms