RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 CCDC85CA6NKD9 419 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
CPNE9-201ENST00000273027 GNAT2P19087 354 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
CPNE9-201ENST00000273027 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 LUZP1Q86V48 1076 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CKAP2LQ8IYA6 745 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 PDCL2Q8N4E4 241 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 WASF1Q92558 559 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 OSBP2Q969R2 916 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
CPNE9-201ENST00000273027 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 PASKQ96RG2 1323 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 CCP110O43303 1012 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 PRC1O43663 620 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 PDE8AO60658 829 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 PPP6R2O75170 966 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 FGAP02671 866 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 ARID4AP29374 1257 aaPredicted RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 ADD2P35612 726 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 ME1P48163 572 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 SNW1Q13573 536 aaKnown RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 STK38Q15208 465 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 SF3A1Q15459 793 aaKnown RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 EAPPQ56P03 285 aaPredicted RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 LDHDQ86WU2 507 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 TMTC2Q8N394 836 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 USP28Q96RU2 1077 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 ORC3Q9UBD5 711 aaPredicted RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 MORC2Q9Y6X9 1032 aaPredicted RBP11.69□□□□□ -0.54
CPNE9-201ENST00000273027 NUP98P52948 1817 aa11.69□□□□□ -0.54
CPNE9-201ENST00000273027 NID2Q14112 1375 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 M0R2C6 588 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 IKBKBO14920 756 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 SPTLC2O15270 562 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 AP5Z1O43299 807 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 CTIFO43310 598 aaKnown RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 IGSF3O75054 1194 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 CMA1P23946 247 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 PDE6BP35913 854 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 LIFRP42702 1097 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 DEFB115Q30KQ5 88 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 METTL24Q5JXM2 366 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 SGMS1Q86VZ5 419 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 FSIP1Q8NA03 581 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 SDF4Q9BRK5 362 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 DNAJC25Q9H1X3 360 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 FAM13BQ9NYF5 915 aa11.68□□□□□ -0.54
CPNE9-201ENST00000273027 HOOK1Q9UJC3 728 aaKnown RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
CPNE9-201ENST00000273027 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 FAM237AA0A1B0GTK4 181 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 GPAA1O43292 621 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
CPNE9-201ENST00000273027 NT5C2P49902 561 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 CTSWP56202 376 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
CPNE9-201ENST00000273027 LRRC8AQ8IWT6 810 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 LPIN2Q92539 896 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
CPNE9-201ENST00000273027 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 LAMB2P55268 1798 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
CPNE9-201ENST00000273027 SCN7AQ01118 1682 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CCDC196A0A1B0GTZ2 297 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 RGL2O15211 777 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 PDE8BO95263 885 aa11.66□□□□□ -0.54
CPNE9-201ENST00000273027 FDPSP14324 419 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms