RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 AOX1Q06278 1338 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 E7EVH7 732 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 C10orf67Q8IYJ2 551 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 PLCB1Q9NQ66 1216 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 GTF3C6Q969F1 213 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 NOX5Q96PH1 765 aa19.52■□□□□ 0.71
NOTCH3-201ENST00000263388 A0A1B0GUL7 405 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 SH3BP5O60239 455 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 HAUS3Q68CZ6 603 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 AFAP1L2Q8N4X5 818 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 TNRQ92752 1358 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 TEX14Q8IWB6 1497 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 TRAF5O00463 557 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 DEXIO95424 95 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 ZBTB40Q9NUA8 1239 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 CFAP74Q9C0B2 1584 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 A2MP01023 1474 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 NPATQ14207 1427 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 RUFY4Q6ZNE9 571 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 TMEM87BQ96K49 555 aa19.51■□□□□ 0.71
NOTCH3-201ENST00000263388 STK10O94804 968 aaKnown RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 HPDP32754 393 aaPredicted RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 TTC16Q8NEE8 873 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 POLR2DO15514 142 aaKnown RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 SPOPO43791 374 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 TERF1P54274 439 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 TBC1D8BQ0IIM8 1120 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 NUF2Q9BZD4 464 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 TTC36A6NLP5 189 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 SH2D4BQ5SQS7 431 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 CCT6BQ92526 530 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 KIFC2Q96AC6 838 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 CA8P35219 290 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 GEN1Q17RS7 908 aa19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 LEO1Q8WVC0 666 aaPredicted RBP19.5■□□□□ 0.71
NOTCH3-201ENST00000263388 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 CEP85LQ5SZL2 805 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 CCDC62Q6P9F0 684 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 FNBP1Q96RU3 617 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 TSNAXIP1Q2TAA8 658 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 SMAP1Q8IYB5 467 aaPredicted RBP19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 ANGEL1Q9UNK9 670 aaKnown RBP19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 CRCPO75575 148 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 ARHGAP25P42331 645 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 F8W031 263 aaPredicted RBP19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 NDUFAB1O14561 156 aa19.49■□□□□ 0.71
NOTCH3-201ENST00000263388 SH3BGRP55822 239 aaPredicted RBP19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 SATB1Q01826 763 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 ZC3H12CQ9C0D7 883 aaKnown RBP19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 HAUS2Q9NVX0 235 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 SYCE1Q8N0S2 351 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 ARHGAP24Q8N264 748 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 SH2D4AQ9H788 454 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 KCNH3Q9ULD8 1083 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 ITIH3Q06033 890 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 ZKSCAN3Q9BRR0 538 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 TFCP2Q12800 502 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 NEDD9Q14511 834 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 PA2G4Q9UQ80 394 aaKnown RBP19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 SLC9C1Q4G0N8 1177 aa19.48■□□□□ 0.71
NOTCH3-201ENST00000263388 STMN1P16949 149 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 PHLDB2Q86SQ0 1253 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 UAP1Q16222 522 aaPredicted RBP19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 PCK1P35558 622 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 ASIC2Q16515 512 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 CDAN1Q8IWY9 1227 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 PLCH2O75038 1416 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 EIF4A2Q14240 407 aaKnown RBP19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 ANO1Q5XXA6 986 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 RABGAP1Q9Y3P9 1069 aa19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 BUB1BO60566 1050 aaPredicted RBP19.47■□□□□ 0.71
NOTCH3-201ENST00000263388 GOLGA6BA6NDN3 693 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 IQCDQ96DY2 449 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 CUTAO60888 179 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 PAK1Q13153 545 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 UTP14CQ5TAP6 766 aaKnown RBP19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 MLKLQ8NB16 471 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 MYO10Q9HD67 2058 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 CCDC117Q8IWD4 279 aaPredicted RBP19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 SEPT14Q6ZU15 432 aa19.46■□□□□ 0.71
NOTCH3-201ENST00000263388 VTI1AQ96AJ9 217 aa19.46■□□□□ 0.7
NOTCH3-201ENST00000263388 HSPA1LP34931 641 aa19.45■□□□□ 0.7
NOTCH3-201ENST00000263388 TMTC1Q8IUR5 882 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms