RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 GNRH1P01148 92 aa28.39■■■□□ 2.14
HMG20B-201ENST00000262949 ARID4AP29374 1257 aaPredicted RBP28.39■■■□□ 2.14
HMG20B-201ENST00000262949 LACTBP83111 547 aaPredicted RBP28.39■■■□□ 2.14
HMG20B-201ENST00000262949 PRPF38BQ5VTL8 546 aaKnown RBP28.39■■■□□ 2.14
HMG20B-201ENST00000262949 SCYL3Q8IZE3 742 aa28.39■■■□□ 2.14
HMG20B-201ENST00000262949 MIER1Q8N108 512 aa28.39■■■□□ 2.14
HMG20B-201ENST00000262949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.39■■■□□ 2.14
HMG20B-201ENST00000262949 CAP1Q01518 475 aa28.38■■■□□ 2.13
HMG20B-201ENST00000262949 DIEXFQ68CQ4 756 aaKnown RBP28.38■■■□□ 2.13
HMG20B-201ENST00000262949 LRP2BPQ9P2M1 347 aa28.38■■■□□ 2.13
HMG20B-201ENST00000262949 CCDC158Q5M9N0 1113 aa28.37■■■□□ 2.13
HMG20B-201ENST00000262949 TBC1D9Q6ZT07 1266 aa28.37■■■□□ 2.13
HMG20B-201ENST00000262949 NOL10Q9BSC4 688 aaKnown RBP28.37■■■□□ 2.13
HMG20B-201ENST00000262949 PTCH2Q9Y6C5 1203 aa28.37■■■□□ 2.13
HMG20B-201ENST00000262949 ZHX2Q9Y6X8 837 aa28.37■■■□□ 2.13
HMG20B-201ENST00000262949 POTEFA5A3E0 1075 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 DDTLA6NHG4 134 aaPredicted RBP28.36■■■□□ 2.13
HMG20B-201ENST00000262949 PHF20L1A8MW92 1017 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 ATP8B2P98198 1209 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 PI16Q6UXB8 463 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 SH3BP5LQ7L8J4 393 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 FASTKD5Q7L8L6 764 aaKnown RBP28.36■■■□□ 2.13
HMG20B-201ENST00000262949 ITPRIPQ8IWB1 547 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 NSUN4Q96CB9 384 aaKnown RBP28.36■■■□□ 2.13
HMG20B-201ENST00000262949 PARK7Q99497 189 aaKnown RBP28.36■■■□□ 2.13
HMG20B-201ENST00000262949 DDX4Q9NQI0 724 aaKnown RBP28.36■■■□□ 2.13
HMG20B-201ENST00000262949 CPA4Q9UI42 421 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 ATRNL1Q5VV63 1379 aa28.36■■■□□ 2.13
HMG20B-201ENST00000262949 CTNND1O60716 968 aaKnown RBP28.35■■■□□ 2.13
HMG20B-201ENST00000262949 SURF6O75683 361 aaKnown RBP28.35■■■□□ 2.13
HMG20B-201ENST00000262949 PRMT2P55345 433 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 MAP3K10Q02779 954 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 POLA2Q14181 598 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 TTC39AQ5SRH9 613 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 C17orf99Q6UX52 265 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 GPR108Q9NPR9 543 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 RFX7Q2KHR2 1363 aa28.35■■■□□ 2.13
HMG20B-201ENST00000262949 NPM3O75607 178 aaKnown RBP28.34■■■□□ 2.13
HMG20B-201ENST00000262949 PTPRAP18433 802 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 HOXD10P28358 340 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 MCAMP43121 646 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 RHBDL3P58872 404 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 TNNI3KQ59H18 835 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 SSH3Q8TE77 659 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 ZNF333Q96JL9 665 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 ARHGAP39Q9C0H5 1083 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 FPGT-TNNI3KV9GXZ4 949 aa28.34■■■□□ 2.13
HMG20B-201ENST00000262949 DOCK2Q92608 1830 aa28.33■■■□□ 2.13
HMG20B-201ENST00000262949 HTTP42858 3142 aa28.32■■■□□ 2.12
HMG20B-201ENST00000262949 SLC4A8Q2Y0W8 1093 aa28.32■■■□□ 2.12
HMG20B-201ENST00000262949 ZNF384Q8TF68 577 aa28.32■■■□□ 2.12
HMG20B-201ENST00000262949 C1orf115Q9H7X2 142 aa28.32■■■□□ 2.12
HMG20B-201ENST00000262949 KIAA0100Q14667 2235 aaKnown RBP28.32■■■□□ 2.12
HMG20B-201ENST00000262949 TBC1D12O60347 775 aa28.31■■■□□ 2.12
HMG20B-201ENST00000262949 ECM2O94769 699 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-201ENST00000262949 FMNL1O95466 1100 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-201ENST00000262949 BAG3O95817 575 aa28.31■■■□□ 2.12
HMG20B-201ENST00000262949 PSMC4P43686 418 aa28.31■■■□□ 2.12
HMG20B-201ENST00000262949 MOGSQ13724 837 aa28.31■■■□□ 2.12
HMG20B-201ENST00000262949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.31■■■□□ 2.12
HMG20B-201ENST00000262949 A0A0G2JLL6 359 aaPredicted RBP28.3■■■□□ 2.12
HMG20B-201ENST00000262949 SLC34A2O95436 690 aa28.3■■■□□ 2.12
HMG20B-201ENST00000262949 GADL1Q6ZQY3 521 aa28.3■■■□□ 2.12
HMG20B-201ENST00000262949 PRRT2Q7Z6L0 340 aaPredicted RBP28.3■■■□□ 2.12
HMG20B-201ENST00000262949 TEX11Q8IYF3 940 aa28.3■■■□□ 2.12
HMG20B-201ENST00000262949 AFG3L2Q9Y4W6 797 aa28.3■■■□□ 2.12
HMG20B-201ENST00000262949 NAA16Q6N069 864 aaPredicted RBP28.29■■■□□ 2.12
HMG20B-201ENST00000262949 DBNDD2Q9BQY9 259 aa28.29■■■□□ 2.12
HMG20B-201ENST00000262949 SNRKQ9NRH2 765 aa28.29■■■□□ 2.12
HMG20B-201ENST00000262949 ZBTB7BO15156 539 aaPredicted RBP28.28■■■□□ 2.12
HMG20B-201ENST00000262949 PLCG2P16885 1265 aa28.28■■■□□ 2.12
HMG20B-201ENST00000262949 EN2P19622 333 aaPredicted RBP28.28■■■□□ 2.12
HMG20B-201ENST00000262949 GPAT2Q6NUI2 795 aa28.28■■■□□ 2.12
HMG20B-201ENST00000262949 OSBPL5Q9H0X9 879 aaPredicted RBP28.28■■■□□ 2.12
HMG20B-201ENST00000262949 TRIM75PA6NK02 468 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 CYP2C8P10632 490 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 RAET1EQ8TD07 263 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 SH3TC2Q8TF17 1288 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 SRRDQ9UH36 339 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 SLC45A1Q9Y2W3 748 aa28.27■■■□□ 2.12
HMG20B-201ENST00000262949 NOP58Q9Y2X3 529 aaKnown RBP28.27■■■□□ 2.12
HMG20B-201ENST00000262949 ADGRA2Q96PE1 1338 aa28.26■■■□□ 2.11
HMG20B-201ENST00000262949 MYCP01106 439 aaPredicted RBP28.26■■■□□ 2.11
HMG20B-201ENST00000262949 ZNF512BQ96KM6 892 aaPredicted RBP28.26■■■□□ 2.11
HMG20B-201ENST00000262949 TRIM47Q96LD4 638 aa28.26■■■□□ 2.11
HMG20B-201ENST00000262949 CENPFP49454 3210 aa28.26■■■□□ 2.11
HMG20B-201ENST00000262949 ZBED9Q6R2W3 1325 aa28.25■■■□□ 2.11
HMG20B-201ENST00000262949 IGSF3O75054 1194 aa28.25■■■□□ 2.11
HMG20B-201ENST00000262949 SLURP2P0DP57 97 aa28.25■■■□□ 2.11
HMG20B-201ENST00000262949 FCGRTP55899 365 aa28.25■■■□□ 2.11
HMG20B-201ENST00000262949 AATFQ9NY61 560 aaKnown RBP eCLIP28.25■■■□□ 2.11
HMG20B-201ENST00000262949 COL2A1P02458 1487 aaPredicted RBP28.24■■■□□ 2.11
HMG20B-201ENST00000262949 RLBP1P12271 317 aa28.24■■■□□ 2.11
HMG20B-201ENST00000262949 OSBPP22059 807 aa28.24■■■□□ 2.11
HMG20B-201ENST00000262949 SH3RF3Q8TEJ3 882 aaPredicted RBP28.24■■■□□ 2.11
HMG20B-201ENST00000262949 SMCR8Q8TEV9 937 aaPredicted RBP28.24■■■□□ 2.11
HMG20B-201ENST00000262949 TBC1D2Q9BYX2 928 aa28.24■■■□□ 2.11
HMG20B-201ENST00000262949 DHX36Q9H2U1 1008 aaKnown RBP28.24■■■□□ 2.11
HMG20B-201ENST00000262949 HERC5Q9UII4 1024 aaKnown RBP28.24■■■□□ 2.11
HMG20B-201ENST00000262949 MYPNQ86TC9 1320 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms