RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ZFPM1Q8IX07 1006 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 NACAP1Q9BZK3 213 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 NAPBQ9H115 298 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 SCAF8Q9UPN6 1271 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 VEGFAP15692 232 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 OSBPL5Q9H0X9 879 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 ZMYM6O95789 1325 aa18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 CNTNAP1P78357 1384 aa18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 BAZ2AQ9UIF9 1905 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-201ENST00000260054 DDX60LQ5H9U9 1706 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 FKBP1CQ5VVH2 108 aa18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 CTR9Q6PD62 1173 aa18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 NAV1Q8NEY1 1877 aa18.86■□□□□ 0.61
CCDC90B-201ENST00000260054 USP17L12C9JPN9 530 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 USP17L21D6R901 530 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 ENTPD3O75355 529 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 SLC4A8Q2Y0W8 1093 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 PNMA8AQ86V59 439 aaPredicted RBP18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 CYP2D7A0A087X1C5 515 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 SMIM22K7EJ46 135 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 POTEIP0CG38 1075 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 POTEJP0CG39 1038 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 CYP2D6P10635 497 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 EVX2Q03828 476 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 PALD1Q9ULE6 856 aa18.85■□□□□ 0.61
CCDC90B-201ENST00000260054 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
CCDC90B-201ENST00000260054 FAM83AQ86UY5 434 aa18.84■□□□□ 0.61
CCDC90B-201ENST00000260054 FAM151AQ8WW52 585 aa18.84■□□□□ 0.61
CCDC90B-201ENST00000260054 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
CCDC90B-201ENST00000260054 CTNNA3Q9UI47 895 aa18.84■□□□□ 0.61
CCDC90B-201ENST00000260054 DDTLA6NHG4 134 aaPredicted RBP18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 CYP21A2P08686 494 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 HSPA4P34932 840 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 HAND2P61296 217 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 TNFAIP1Q13829 316 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 RASA3Q14644 834 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 SBK1Q52WX2 424 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 APOBEC3FQ8IUX4 373 aaKnown RBP18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 ZC3H15Q8WU90 426 aaKnown RBP18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 TMEM39BQ9GZU3 492 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 PITPNM2Q9BZ72 1349 aa18.83■□□□□ 0.61
CCDC90B-201ENST00000260054 MYH1P12882 1939 aa18.83■□□□□ 0.6
CCDC90B-201ENST00000260054 ATRNL1Q5VV63 1379 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 SLC27A2O14975 620 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 POLR3DP05423 398 aaPredicted RBP18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 TNNI2P48788 182 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 PLCD1P51178 756 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 PPARAQ07869 468 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 C12orf60Q5U649 245 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 CREB3L3Q68CJ9 461 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 CDAN1Q8IWY9 1227 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 DEFB129Q9H1M3 183 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 COL2A1P02458 1487 aaPredicted RBP18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 DCPSQ96C86 337 aaKnown RBP18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
CCDC90B-201ENST00000260054 ZNF213O14771 459 aa18.81■□□□□ 0.6
CCDC90B-201ENST00000260054 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-201ENST00000260054 DHX36Q9H2U1 1008 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-201ENST00000260054 UPF2Q9HAU5 1272 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-201ENST00000260054 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 RASEFQ8IZ41 740 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 TEPSINQ96N21 525 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 ANAPC4Q9UJX5 808 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 POLR2AP24928 1970 aaKnown RBP18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 LAMB1P07942 1786 aa18.8■□□□□ 0.6
CCDC90B-201ENST00000260054 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 KCNB2Q92953 911 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 CLEC11AQ9Y240 323 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 LAMA4Q16363 1823 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 ADM5C9JUS6 153 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 SLURP2P0DP57 97 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 MCCP23508 829 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 PRAMEF18Q5VWM3 479 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 DLK2Q6UY11 383 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 KRT26Q7Z3Y9 468 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 SULF1Q8IWU6 871 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 STK11IPQ8N1F8 1099 aa18.79■□□□□ 0.6
CCDC90B-201ENST00000260054 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms