RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 CNNM3Q8NE01 707 aa15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 JARID2Q92833 1246 aaPredicted RBP15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 TRIM5Q9C035 493 aa15.27■□□□□ 0.03
PRPF38A-201ENST00000257181 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 STX10O60499 249 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 SPA17Q15506 151 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 UBE3CQ15386 1083 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 PRPHP41219 470 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 MAP3K11Q16584 847 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 CCDC181Q5TID7 509 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 SUCLG2Q96I99 432 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 HACL1Q9UJ83 578 aa15.26■□□□□ 0.03
PRPF38A-201ENST00000257181 PABPN1LA6NDY0 278 aaKnown RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 IBSPP21815 317 aaPredicted RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 STRN3Q13033 797 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 CNPY2Q9Y2B0 182 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 HAND2P61296 217 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 COA7Q96BR5 231 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 MTIF3Q9H2K0 278 aaKnown RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 EN1Q05925 392 aaPredicted RBP15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 CTAGE1Q96RT6 745 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
PRPF38A-201ENST00000257181 PDE8BO95263 885 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 FASTKD5Q7L8L6 764 aaKnown RBP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 CEP83Q9Y592 693 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 TOP1P11387 765 aaKnown RBP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 KIF4BQ2VIQ3 1234 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 PTPDC1A2A3K4 754 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 STAT6P42226 847 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 BTDP43251 543 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 YWHAEP62258 255 aaKnown RBP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 SAP30BPQ9UHR5 308 aaKnown RBP15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 E9PCH4 1651 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 TMOD1P28289 359 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
PRPF38A-201ENST00000257181 CCDC65Q8IXS2 484 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 TCHPQ9BT92 498 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 DDAH1O94760 285 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 PDE4DQ08499 809 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 KANSL2Q9H9L4 492 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 DPP9Q86TI2 863 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 CCDC155Q8N6L0 562 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 KIAA1210Q9ULL0 1709 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 GPBP1L1Q9HC44 474 aaPredicted RBP15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
PRPF38A-201ENST00000257181 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 TMEM106CQ9BVX2 250 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 ICA1Q05084 483 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 GCOM1H8Y6P7 765 aaPredicted RBP15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 XPOTO43592 962 aaKnown RBP15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 POLR2MP0CAP2 368 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 TGFBRAP1Q8WUH2 860 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 GOLGA1Q92805 767 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 ZBTB40Q9NUA8 1239 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 USP32Q8NFA0 1604 aa15.22■□□□□ 0.03
PRPF38A-201ENST00000257181 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 KCNH4Q9UQ05 1017 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 P4HA1P13674 534 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 GPAA1O43292 621 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 RILPL1Q5EBL4 403 aa15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
PRPF38A-201ENST00000257181 KIF2AO00139 706 aaPredicted RBP15.21■□□□□ 0.02
PRPF38A-201ENST00000257181 IDEP14735 1019 aa15.21■□□□□ 0.02
PRPF38A-201ENST00000257181 BRF1Q92994 677 aa15.21■□□□□ 0.02
PRPF38A-201ENST00000257181 ABCC12Q96J65 1359 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 YEATS4O95619 227 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 TFDP1Q14186 410 aa15.2■□□□□ 0.02
PRPF38A-201ENST00000257181 TCP10L2B9ZVM9 353 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms