RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PAG1Q9NWQ8 432 aa29.57■■■□□ 2.32
SDF2L1-201ENST00000248958 CSADQ9Y600 493 aa29.57■■■□□ 2.32
SDF2L1-201ENST00000248958 GOLIM4O00461 696 aa29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 FOXN1O15353 648 aa29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 PICALMQ13492 652 aa29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 SPRYD7Q5W111 196 aa29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 ZSCAN29Q8IWY8 852 aaPredicted RBP29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 RWDD1Q9H446 243 aaPredicted RBP29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 DDX4Q9NQI0 724 aaKnown RBP29.56■■■□□ 2.32
SDF2L1-201ENST00000248958 COL2A1P02458 1487 aaPredicted RBP29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 LAMB1P07942 1786 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 ADGRA1Q86SQ6 560 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 ZFPM1Q8IX07 1006 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 CLMNQ96JQ2 1002 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 CSRNP1Q96S65 589 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 FOCADQ5VW36 1801 aa29.55■■■□□ 2.32
SDF2L1-201ENST00000248958 ATRNL1Q5VV63 1379 aa29.54■■■□□ 2.32
SDF2L1-201ENST00000248958 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.54■■■□□ 2.32
SDF2L1-201ENST00000248958 SH3RF3Q8TEJ3 882 aaPredicted RBP29.54■■■□□ 2.32
SDF2L1-201ENST00000248958 WNK4Q96J92 1243 aa29.54■■■□□ 2.32
SDF2L1-201ENST00000248958 CDK5RAP2Q96SN8 1893 aa29.54■■■□□ 2.32
SDF2L1-201ENST00000248958 TTC41PQ6P2S7 1318 aa29.53■■■□□ 2.32
SDF2L1-201ENST00000248958 SREBF2Q12772 1141 aa29.53■■■□□ 2.32
SDF2L1-201ENST00000248958 MIGA2Q7L4E1 593 aa29.53■■■□□ 2.32
SDF2L1-201ENST00000248958 WRNIP1Q96S55 665 aa29.53■■■□□ 2.32
SDF2L1-201ENST00000248958 INHBEP58166 350 aa29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 SLC9C2Q5TAH2 1124 aa29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 TNS4Q8IZW8 715 aa29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.52■■■□□ 2.321e-6■■■■□ 20.5
SDF2L1-201ENST00000248958 OSBPL5Q9H0X9 879 aaPredicted RBP29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 SAGE1Q9NXZ1 904 aa29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 ZNF112Q9UJU3 913 aa29.52■■■□□ 2.32
SDF2L1-201ENST00000248958 MYH7P12883 1935 aa29.51■■■□□ 2.32
SDF2L1-201ENST00000248958 DDTLA6NHG4 134 aaPredicted RBP29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 MANSC4A6NHS7 340 aaPredicted RBP29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 TM4SF4P48230 202 aa29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 VGLL4Q14135 290 aa29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 ANKRD45Q5TZF3 282 aa29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 SH3BP5LQ7L8J4 393 aa29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 ELP3Q9H9T3 547 aa29.51■■■□□ 2.31
SDF2L1-201ENST00000248958 ERC2O15083 957 aa29.5■■■□□ 2.31
SDF2L1-201ENST00000248958 PDE6AP16499 860 aa29.5■■■□□ 2.31
SDF2L1-201ENST00000248958 MAP3K10Q02779 954 aa29.5■■■□□ 2.31
SDF2L1-201ENST00000248958 DHX36Q9H2U1 1008 aaKnown RBP29.5■■■□□ 2.31
SDF2L1-201ENST00000248958 PRDM10Q9NQV6 1147 aa29.5■■■□□ 2.31
SDF2L1-201ENST00000248958 TBC1D12O60347 775 aa29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 HSPA8P11142 646 aaKnown RBP29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 MKRN3Q13064 507 aaKnown RBP29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 ZSCAN25Q6NSZ9 544 aa29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 TGFBRAP1Q8WUH2 860 aa29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 OPTNQ96CV9 577 aa29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.49■■■□□ 2.31
SDF2L1-201ENST00000248958 DYNLL1P63167 89 aaKnown RBP29.48■■■□□ 2.31
SDF2L1-201ENST00000248958 EDC3Q96F86 508 aaKnown RBP29.48■■■□□ 2.31
SDF2L1-201ENST00000248958 ZNF532Q9HCE3 1301 aa29.47■■■□□ 2.31
SDF2L1-201ENST00000248958 ERO1BQ86YB8 467 aa29.47■■■□□ 2.31
SDF2L1-201ENST00000248958 SMC5Q8IY18 1101 aa29.47■■■□□ 2.31
SDF2L1-201ENST00000248958 MIGA1Q8NAN2 632 aa29.47■■■□□ 2.31
SDF2L1-201ENST00000248958 SNCAIPQ9Y6H5 919 aa29.47■■■□□ 2.31
SDF2L1-201ENST00000248958 FLT1P17948 1338 aa29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 MAGEB6P1A0A0J9YX57 407 aa29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 SPDYE5A6NIY4 337 aa29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 NOL9Q5SY16 702 aaKnown RBP29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 ZKSCAN4Q969J2 545 aaPredicted RBP29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 RNF186Q9NXI6 227 aa29.46■■■□□ 2.31
SDF2L1-201ENST00000248958 GLRX3O76003 335 aaKnown RBP29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 ADD2P35612 726 aa29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 LBX1P52954 281 aa29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 MAPKAPK5Q8IW41 473 aa29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 RIOK1Q9BRS2 568 aaKnown RBP29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 PI4KBQ9UBF8 816 aa29.45■■■□□ 2.31
SDF2L1-201ENST00000248958 TCRBV5S4A2TA0A5A2 114 aa29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 MX1P20591 662 aa29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 INPP5BP32019 993 aa29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 USP5P45974 858 aa29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 UBE3CQ15386 1083 aa29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 HERC5Q9UII4 1024 aaKnown RBP29.44■■■□□ 2.3
SDF2L1-201ENST00000248958 MYH1P12882 1939 aa29.43■■■□□ 2.3
SDF2L1-201ENST00000248958 PHF20L1A8MW92 1017 aa29.43■■■□□ 2.3
SDF2L1-201ENST00000248958 ALDH1A1P00352 501 aa29.43■■■□□ 2.3
SDF2L1-201ENST00000248958 GJA5P36382 358 aa29.43■■■□□ 2.3
SDF2L1-201ENST00000248958 PPATQ06203 517 aa29.43■■■□□ 2.3
SDF2L1-201ENST00000248958 TRPA1O75762 1119 aa29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 GTF2A2P52657 109 aa29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 KBTBD3Q8NAB2 608 aa29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 OTUD5Q96G74 571 aa29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 CRNKL1Q9BZJ0 848 aaKnown RBP29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.42■■■□□ 2.3
SDF2L1-201ENST00000248958 TESPA1A2RU30 521 aaPredicted RBP29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 CTNND1O60716 968 aaKnown RBP29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 HLA-DOAP06340 250 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 PPIL2Q13356 520 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 LRRFIP1Q32MZ4 808 aaKnown RBP29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 TSHZ3Q63HK5 1081 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 OTUD7BQ6GQQ9 843 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 FOXP4Q8IVH2 680 aaPredicted RBP29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 PI4K2BQ8TCG2 481 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 SALL3Q9BXA9 1300 aa29.41■■■□□ 2.3
SDF2L1-201ENST00000248958 DOCK1Q14185 1865 aa29.4■■■□□ 2.3
SDF2L1-201ENST00000248958 IGHDP01880 384 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms