RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 H3BQF6 201 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 TAF5LO75529 589 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 SCP2P22307 547 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 GCKRQ14397 625 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 TTC39AQ5SRH9 613 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 FANCLQ9NW38 375 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 PHLPP2Q6ZVD8 1323 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 SATB1Q01826 763 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 SCRN1Q12765 414 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 HLTFQ14527 1009 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIX1-201ENST00000247182 MCMDC2Q4G0Z9 681 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 AMOTQ4VCS5 1084 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 SND1Q7KZF4 910 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIX1-201ENST00000247182 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
SIX1-201ENST00000247182 KCNH5Q8NCM2 988 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 CAPS2Q9BXY5 557 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
SIX1-201ENST00000247182 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
SIX1-201ENST00000247182 KNDC1Q76NI1 1749 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 PI16Q6UXB8 463 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 B4GALNT4Q76KP1 1039 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 SRGAP1Q7Z6B7 1085 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 RIN2Q8WYP3 895 aaPredicted RBP11.32□□□□□ -0.6
SIX1-201ENST00000247182 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 PSMB7Q99436 277 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 TMEM131LA2VDJ0 1609 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 N4BP3O15049 544 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 MICU3Q86XE3 530 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 ANKLE2Q86XL3 938 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 HELBQ8NG08 1087 aaPredicted RBP11.32□□□□□ -0.6
SIX1-201ENST00000247182 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
SIX1-201ENST00000247182 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 AOX1Q06278 1338 aa11.32□□□□□ -0.6
SIX1-201ENST00000247182 KLF18A0A0U1RQI7 1052 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 ZNF202O95125 648 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 NAPGQ99747 312 aaPredicted RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 CORO7P57737 925 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 TTLL7Q6ZT98 887 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 IFT81Q8WYA0 676 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 KIF1CO43896 1103 aaKnown RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 IFT88Q13099 833 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 SIRT1Q96EB6 747 aa11.31□□□□□ -0.6
SIX1-201ENST00000247182 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
SIX1-201ENST00000247182 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 ENC1O14682 589 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 HNRNPH1P31943 449 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 NDUFA8P51970 172 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 TOM1L2Q6ZVM7 507 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 PPANQ9NQ55 473 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 HGSO14964 777 aaPredicted RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 OPA1O60313 960 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 BUB1BO60566 1050 aaPredicted RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 ARID4AP29374 1257 aaPredicted RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 CCDC57Q2TAC2 916 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 EIF4E1BA6NMX2 242 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 AFMP43652 599 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 SPATS2LQ9NUQ6 558 aaKnown RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
SIX1-201ENST00000247182 NFE2L3Q9Y4A8 694 aa11.3□□□□□ -0.6
SIX1-201ENST00000247182 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
SIX1-201ENST00000247182 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 SLF1Q9BQI6 1058 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 FUT8Q9BYC5 575 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 IQCB1Q15051 598 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 NAIF1Q69YI7 327 aaPredicted RBP11.29□□□□□ -0.6
SIX1-201ENST00000247182 AIFM3Q96NN9 605 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 CDC23Q9UJX2 597 aa11.29□□□□□ -0.6
SIX1-201ENST00000247182 PPP1R12BO60237 982 aaPredicted RBP11.29□□□□□ -0.6
SIX1-201ENST00000247182 ZNF827Q17R98 1081 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms