RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
SDF2-201ENST00000247020 MINDY4BA8MYZ0 360 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 ECE2O60344 883 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
SDF2-201ENST00000247020 MCM4P33991 863 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 BTDP43251 543 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 ESR2Q92731 530 aa16.7■□□□□ 0.26
SDF2-201ENST00000247020 C21orf2O43822 256 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 ORC4O43929 436 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
SDF2-201ENST00000247020 USP5P45974 858 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 RCAN1P53805 252 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
SDF2-201ENST00000247020 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
SDF2-201ENST00000247020 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 ZDHHC9Q9Y397 364 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 NID2Q14112 1375 aa16.69■□□□□ 0.26
SDF2-201ENST00000247020 USP17L12C9JPN9 530 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 USP17L21D6R901 530 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 GOLGA6L22H0YM25 854 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 KDM4AO75164 1064 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 SCRN1Q12765 414 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 IGDCC4Q8TDY8 1250 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.68■□□□□ 0.26
SDF2-201ENST00000247020 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
SDF2-201ENST00000247020 DAGLAQ9Y4D2 1042 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 STX6O43752 255 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 SYT1P21579 422 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 PDE4BQ07343 736 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 STK3Q13188 491 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 PKP1Q13835 747 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
SDF2-201ENST00000247020 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
SDF2-201ENST00000247020 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 ERICH2A1L162 156 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 PPIP5K2O43314 1243 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 RHBDL3P58872 404 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 AOC3Q16853 763 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 C12orf60Q5U649 245 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 FBXW7Q969H0 707 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 MCM9Q9NXL9 1143 aa16.67■□□□□ 0.26
SDF2-201ENST00000247020 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
SDF2-201ENST00000247020 TTF2Q9UNY4 1162 aaKnown RBP16.67■□□□□ 0.26
SDF2-201ENST00000247020 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
SDF2-201ENST00000247020 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
SDF2-201ENST00000247020 ZSCAN22P10073 491 aaPredicted RBP16.66■□□□□ 0.26
SDF2-201ENST00000247020 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
SDF2-201ENST00000247020 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
SDF2-201ENST00000247020 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 RRP12Q5JTH9 1297 aaKnown RBP16.65■□□□□ 0.26
SDF2-201ENST00000247020 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
SDF2-201ENST00000247020 TGFBRAP1Q8WUH2 860 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 ADAMTSL1Q8N6G6 1762 aa16.65■□□□□ 0.26
SDF2-201ENST00000247020 WTAPQ15007 396 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
SDF2-201ENST00000247020 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
SDF2-201ENST00000247020 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 MYH8P13535 1937 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 FLT1P17948 1338 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
SDF2-201ENST00000247020 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
SDF2-201ENST00000247020 SERPINA10Q9UK55 444 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms