RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 PLEKHA4Q9H4M7 779 aa15.62■□□□□ 0.09
NCLN-201ENST00000246117 CNNM2Q9H8M5 875 aa15.62■□□□□ 0.09
NCLN-201ENST00000246117 JADE2Q9NQC1 790 aa15.62■□□□□ 0.09
NCLN-201ENST00000246117 PDE8AO60658 829 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 SEC63Q9UGP8 760 aaKnown RBP15.61■□□□□ 0.09
NCLN-201ENST00000246117 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 USP17L21D6R901 530 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 TSPY3P0CV98 308 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 TSPY8P0CW00 308 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 CTSWP56202 376 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 ZNF274Q96GC6 653 aaPredicted RBP15.61■□□□□ 0.09
NCLN-201ENST00000246117 CEP89Q96ST8 783 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 PDE4BQ07343 736 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 C8orf37Q96NL8 207 aa15.61■□□□□ 0.09
NCLN-201ENST00000246117 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 APOA5Q6Q788 366 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 RABEP2Q9H5N1 569 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 TCEAL9Q9UHQ7 104 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 CTNND2Q9UQB3 1225 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 DIP2CQ9Y2E4 1556 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 CEP170BQ9Y4F5 1589 aaPredicted RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 MYOM1P52179 1685 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 LEKR1Q6ZMV7 388 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 IGSF22Q8N9C0 903 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 CCDC43Q96MW1 224 aaKnown RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 NLRP3Q96P20 1036 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 NLRP12P59046 1061 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 LINC00301Q8NCQ3 95 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 CRNKL1Q9BZJ0 848 aaKnown RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 TAB2Q9NYJ8 693 aa15.6■□□□□ 0.09
NCLN-201ENST00000246117 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
NCLN-201ENST00000246117 MCAMP43121 646 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
NCLN-201ENST00000246117 LPIN2Q92539 896 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 KCNF1Q9H3M0 494 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 RCOR1Q9UKL0 485 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 OVOS2A0A0J9YW53 1432 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 OVOS2Q6IE36 1432 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 UBE2Q2LH0YL09 131 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 AP5Z1O43299 807 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 ASIC1P78348 528 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 AKNAD1Q5T1N1 836 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 ERLIN1O75477 346 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 UBXN1Q04323 297 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 LETM2Q2VYF4 491 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 MMRN2Q9H8L6 949 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 RIMBP2O15034 1052 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 PDE8BO95263 885 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 YEATS4O95619 227 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 KRT2P35908 639 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 POSTNQ15063 836 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 ZBTB38Q8NAP3 1195 aaPredicted RBP15.59■□□□□ 0.09
NCLN-201ENST00000246117 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
NCLN-201ENST00000246117 TDRD7Q8NHU6 1098 aaKnown RBP15.59■□□□□ 0.09
NCLN-201ENST00000246117 RASGRP4Q8TDF6 673 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 PIGBQ92521 554 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.59■□□□□ 0.09
NCLN-201ENST00000246117 TCP11L1Q9NUJ3 509 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 ZSWIM5Q9P217 1185 aa15.59■□□□□ 0.09
NCLN-201ENST00000246117 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
NCLN-201ENST00000246117 RAD51AP2Q09MP3 1159 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 ZNF654Q8IZM8 581 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 TCERG1LQ5VWI1 586 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 GOLGA8HP0CJ92 632 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 DNAJC21Q5F1R6 531 aaKnown RBP15.58■□□□□ 0.08
NCLN-201ENST00000246117 ZFYVE27Q5T4F4 411 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 TMEM87BQ96K49 555 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 EPC1Q9H2F5 836 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 ARFGAP3Q9NP61 516 aa15.58■□□□□ 0.08
NCLN-201ENST00000246117 NAPAP54920 295 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.57■□□□□ 0.08
NCLN-201ENST00000246117 GPKOWQ92917 476 aaPredicted RBP eCLIP15.57■□□□□ 0.08
NCLN-201ENST00000246117 ACBD3Q9H3P7 528 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.57■□□□□ 0.08
NCLN-201ENST00000246117 BAZ2BQ9UIF8 2168 aaKnown RBP15.57■□□□□ 0.08
NCLN-201ENST00000246117 CCDC175P0C221 793 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 KIF23Q02241 960 aaPredicted RBP15.57■□□□□ 0.08
NCLN-201ENST00000246117 USP31Q70CQ4 1352 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 FOXN1O15353 648 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 SPA17Q15506 151 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 TBC1D10CQ8IV04 446 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 AK7Q96M32 723 aa15.57■□□□□ 0.08
NCLN-201ENST00000246117 TNKSO95271 1327 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 SALL3Q9BXA9 1300 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 RNASE9P60153 205 aaKnown RBP15.56■□□□□ 0.08
NCLN-201ENST00000246117 PDIA6Q15084 440 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 TMTC2Q8N394 836 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 LCORLQ8N3X6 602 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 CRACR2BQ8N4Y2 399 aaPredicted RBP15.56■□□□□ 0.08
NCLN-201ENST00000246117 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
NCLN-201ENST00000246117 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 PTPRUQ92729 1446 aa15.56■□□□□ 0.08
NCLN-201ENST00000246117 AKR1B10O60218 316 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms