RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SYKP43405 635 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 GNL2Q13823 731 aaKnown RBP25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 TRIM29Q14134 588 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 AKNAD1Q5T1N1 836 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 KRT23Q9C075 422 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 LAMB2P55268 1798 aa25.02■■□□□ 1.6
SH2D3A-201ENST00000245908 IFIT3O14879 490 aaKnown RBP25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 MYL10Q9BUA6 226 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 UTP14AQ9BVJ6 771 aaKnown RBP25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 SLC12A7Q9Y666 1083 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 RREB1Q92766 1687 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 PNPLA7Q6ZV29 1317 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 KIF20AO95235 890 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 INTS5Q6P9B9 1019 aaKnown RBP25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 SHC4Q6S5L8 630 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 ANKRD7Q92527 254 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 KCND1Q9NSA2 647 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 TUBE1Q9UJT0 475 aa25.01■■□□□ 1.59
SH2D3A-201ENST00000245908 RTL9Q8NET4 1388 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 SNAP23O00161 211 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 BIN1O00499 593 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 FMNL1O95466 1100 aaPredicted RBP25■■□□□ 1.59
SH2D3A-201ENST00000245908 GNAT2P19087 354 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 SSRP1Q08945 709 aaKnown RBP25■■□□□ 1.59
SH2D3A-201ENST00000245908 NCAPHQ15003 741 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 EIF4ENIF1Q9NRA8 985 aaKnown RBP25■■□□□ 1.59
SH2D3A-201ENST00000245908 CCDC87Q9NVE4 849 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 TPM4P67936 248 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 RESP18Q5W5W9 173 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 STAG1Q8WVM7 1258 aa25■■□□□ 1.59
SH2D3A-201ENST00000245908 IKBKBO14920 756 aa24.99■■□□□ 1.59
SH2D3A-201ENST00000245908 IFNAR1P17181 557 aa24.99■■□□□ 1.59
SH2D3A-201ENST00000245908 COL22A1Q8NFW1 1626 aaPredicted RBP24.99■■□□□ 1.59
SH2D3A-201ENST00000245908 SYCP1Q15431 976 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 PARP10Q53GL7 1025 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 MFSD6Q6ZSS7 791 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 WASF1Q92558 559 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 SLC26A6Q9BXS9 759 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 XPO4Q9C0E2 1151 aaKnown RBP24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 USP27XA6NNY8 438 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 CUTAO60888 179 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 CCDC152Q4G0S7 254 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 NYAP1Q6ZVC0 841 aa24.98■■□□□ 1.59
SH2D3A-201ENST00000245908 CEP135Q66GS9 1140 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 LCORLQ8N3X6 602 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 MTA3Q9BTC8 594 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 NACAP1Q9BZK3 213 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 IFNKQ9P0W0 207 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 PRKAB2O43741 272 aa24.97■■□□□ 1.59
SH2D3A-201ENST00000245908 CICQ96RK0 1608 aaPredicted RBP24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 SMC2O95347 1197 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 CRKLP46109 303 aaKnown RBP24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 SLC4A4Q9Y6R1 1079 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 UBE2Q2LH0YL09 131 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 IGHMBP2P38935 993 aaKnown RBP24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 TDO2P48775 406 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 BCAMP50895 628 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 CCDC150Q8NCX0 1101 aa24.96■■□□□ 1.59
SH2D3A-201ENST00000245908 CCAR2Q8N163 923 aaKnown RBP24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 CCDC112Q8NEF3 446 aa24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 NTSR2O95665 410 aa24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 DHX8Q14562 1220 aaKnown RBP24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 SART3Q15020 963 aaKnown RBP24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 NOSTRINQ8IVI9 506 aa24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 CLIC6Q96NY7 704 aa24.95■■□□□ 1.58
SH2D3A-201ENST00000245908 BCL9LQ86UU0 1499 aa24.94■■□□□ 1.58
SH2D3A-201ENST00000245908 MMP1P03956 469 aa24.94■■□□□ 1.58
SH2D3A-201ENST00000245908 WTAPQ15007 396 aa24.94■■□□□ 1.58
SH2D3A-201ENST00000245908 PTPN14Q15678 1187 aa24.94■■□□□ 1.58
SH2D3A-201ENST00000245908 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
SH2D3A-201ENST00000245908 RCAN1P53805 252 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 RTN1Q16799 776 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 PPP4R3BQ5MIZ7 849 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 TMC6Q7Z403 805 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 PDCL2Q8N4E4 241 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 HSD3B7Q9H2F3 369 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 TAOK2Q9UL54 1235 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 CBX1P83916 185 aa24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
SH2D3A-201ENST00000245908 GUCY1A2P33402 732 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 NCBP1Q09161 790 aaKnown RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 PNOCQ13519 176 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 RRP12Q5JTH9 1297 aaKnown RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 TRIM22Q8IYM9 498 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 TMTC2Q8N394 836 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 RNF41Q9H4P4 317 aaPredicted RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 FANCCQ00597 558 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 CHRNDQ07001 517 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 SAFBQ15424 915 aaKnown RBP eCLIP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 ARMCX5Q6P1M9 558 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 KRBA2Q6ZNG9 492 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 METTL16Q86W50 562 aaKnown RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 ELOA2Q8IYF1 753 aaPredicted RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 KRI1Q8N9T8 703 aaKnown RBP24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 KCNH3Q9ULD8 1083 aa24.92■■□□□ 1.58
SH2D3A-201ENST00000245908 MYH14Q7Z406 1995 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms