RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 KDM4AO75164 1064 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 DPEP1P16444 411 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 KCNA3P22001 575 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 BTDP43251 543 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 USP5P45974 858 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 STRIP1Q5VSL9 837 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 SGMS1Q86VZ5 419 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 AMOTL1Q8IY63 956 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 TMTC2Q8N394 836 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 SMARCC2Q8TAQ2 1214 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 VPS33BQ9H267 617 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 KIF3AQ9Y496 699 aa27.96■■■□□ 2.07
RRP9-201ENST00000232888 SH3RF3Q8TEJ3 882 aaPredicted RBP27.95■■■□□ 2.07
RRP9-201ENST00000232888 PSMD1Q99460 953 aa27.95■■■□□ 2.07
RRP9-201ENST00000232888 MRIQ9BWK5 157 aa27.95■■■□□ 2.07
RRP9-201ENST00000232888 TACC3Q9Y6A5 838 aa27.95■■■□□ 2.07
RRP9-201ENST00000232888 KLF18A0A0U1RQI7 1052 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 ORC4O43929 436 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 ZBTB7AO95365 584 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 MYH2Q9UKX2 1941 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 C21orf2O43822 256 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 ZSCAN22P10073 491 aaPredicted RBP27.94■■■□□ 2.06
RRP9-201ENST00000232888 TMEM67Q5HYA8 995 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 TOMM22Q9NS69 142 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
RRP9-201ENST00000232888 BRPF3Q9ULD4 1205 aa27.94■■■□□ 2.06
RRP9-201ENST00000232888 IFIT3O14879 490 aaKnown RBP27.93■■■□□ 2.06
RRP9-201ENST00000232888 ECE2O60344 883 aa27.93■■■□□ 2.06
RRP9-201ENST00000232888 LARP1BQ659C4 914 aaKnown RBP27.93■■■□□ 2.06
RRP9-201ENST00000232888 CERS5Q8N5B7 392 aa27.93■■■□□ 2.06
RRP9-201ENST00000232888 FBXW7Q969H0 707 aa27.93■■■□□ 2.06
RRP9-201ENST00000232888 GPHNQ9NQX3 736 aaPredicted RBP27.93■■■□□ 2.06
RRP9-201ENST00000232888 MCM9Q9NXL9 1143 aa27.93■■■□□ 2.06
RRP9-201ENST00000232888 ATP6V1DQ9Y5K8 247 aa27.93■■■□□ 2.06
RRP9-201ENST00000232888 ERICH2A1L162 156 aa27.92■■■□□ 2.06
RRP9-201ENST00000232888 RRP12Q5JTH9 1297 aaKnown RBP27.92■■■□□ 2.06
RRP9-201ENST00000232888 HHIPL2Q6UWX4 724 aa27.92■■■□□ 2.06
RRP9-201ENST00000232888 UPF1Q92900 1129 aaKnown RBP eCLIP27.92■■■□□ 2.06
RRP9-201ENST00000232888 DBNDD1Q9H9R9 158 aa27.92■■■□□ 2.06
RRP9-201ENST00000232888 LY9Q9HBG7 655 aa27.92■■■□□ 2.06
RRP9-201ENST00000232888 INCENPQ9NQS7 918 aa27.92■■■□□ 2.06
RRP9-201ENST00000232888 NAP1L2Q9ULW6 460 aaPredicted RBP27.92■■■□□ 2.06
RRP9-201ENST00000232888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.92■■■□□ 2.06
RRP9-201ENST00000232888 GOLGA8BA8MQT2 603 aa27.91■■■□□ 2.06
RRP9-201ENST00000232888 RCAN1P53805 252 aa27.91■■■□□ 2.06
RRP9-201ENST00000232888 PDE4BQ07343 736 aa27.91■■■□□ 2.06
RRP9-201ENST00000232888 C12orf60Q5U649 245 aa27.91■■■□□ 2.06
RRP9-201ENST00000232888 NSUN7Q8NE18 718 aaKnown RBP27.91■■■□□ 2.06
RRP9-201ENST00000232888 TTF2Q9UNY4 1162 aaKnown RBP27.91■■■□□ 2.06
RRP9-201ENST00000232888 DAGLAQ9Y4D2 1042 aa27.91■■■□□ 2.06
RRP9-201ENST00000232888 HDLBPQ00341 1268 aaKnown RBP27.9■■■□□ 2.06
RRP9-201ENST00000232888 TEX11Q8IYF3 940 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 PIM2Q9P1W9 311 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 HPS5Q9UPZ3 1129 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 USP17L3A6NCW0 530 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 USP17L4A6NCW7 530 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 RHBDL3P58872 404 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 USP17L1Q7RTZ2 530 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 TGFBRAP1Q8WUH2 860 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 UBAC1Q9BSL1 405 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 MTMR6Q9Y217 621 aa27.9■■■□□ 2.06
RRP9-201ENST00000232888 ATF5Q9Y2D1 282 aaPredicted RBP27.9■■■□□ 2.06
RRP9-201ENST00000232888 ROBO3Q96MS0 1386 aa27.89■■■□□ 2.06
RRP9-201ENST00000232888 LAMB1P07942 1786 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 CCT2P78371 535 aaKnown RBP27.89■■■□□ 2.05
RRP9-201ENST00000232888 AOC3Q16853 763 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 DACT2Q5SW24 774 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 APOA5Q6Q788 366 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 SYNE3Q6ZMZ3 975 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 NFXL1Q6ZNB6 911 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 NKX2-3Q8TAU0 364 aa27.89■■■□□ 2.05
RRP9-201ENST00000232888 BAZ2AQ9UIF9 1905 aaKnown RBP27.89■■■□□ 2.05
RRP9-201ENST00000232888 CYP2D7A0A087X1C5 515 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 CCDC69A6NI79 296 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 PPIP5K2O43314 1243 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 WTAPQ15007 396 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 SKOR2Q2VWA4 1001 aaPredicted RBP27.88■■■□□ 2.05
RRP9-201ENST00000232888 FAM184AQ8NB25 1140 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 TEKT1Q969V4 418 aa27.88■■■□□ 2.05
RRP9-201ENST00000232888 PTPDC1A2A3K4 754 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 CTDNEP1O95476 244 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 F13A1P00488 732 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 R3HDM1Q15032 1099 aaKnown RBP27.87■■■□□ 2.05
RRP9-201ENST00000232888 IQCA1Q86XH1 822 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 RGS22Q8NE09 1264 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 ZNF287Q9HBT7 754 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 SLC12A7Q9Y666 1083 aa27.87■■■□□ 2.05
RRP9-201ENST00000232888 NID2Q14112 1375 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 ZBTB43O43298 467 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 JAK2O60674 1132 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 USP17L8P0C7I0 530 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 CPLX2Q6PUV4 134 aaKnown RBP27.86■■■□□ 2.05
RRP9-201ENST00000232888 CD2APQ9Y5K6 639 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 CPLX1O14810 134 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 CDKL5O76039 1030 aa27.86■■■□□ 2.05
RRP9-201ENST00000232888 METAP2P50579 478 aaKnown RBP eCLIP27.86■■■□□ 2.05
RRP9-201ENST00000232888 NCOA5Q9HCD5 579 aaKnown RBP27.86■■■□□ 2.05
RRP9-201ENST00000232888 PPP2R5BQ15173 497 aa27.85■■■□□ 2.05
RRP9-201ENST00000232888 ZSCAN10Q96SZ4 725 aaPredicted RBP27.85■■■□□ 2.05
RRP9-201ENST00000232888 FLT1P17948 1338 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms