RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 JDP2Q8WYK2 163 aa13.15□□□□□ -0.31
CCND1-201ENST00000227507 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.31
CCND1-201ENST00000227507 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 TULP2O00295 520 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 SARM1Q6SZW1 724 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
CCND1-201ENST00000227507 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
CCND1-201ENST00000227507 KLHL10Q6JEL2 608 aa13.14□□□□□ -0.31
CCND1-201ENST00000227507 ZNF213O14771 459 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 MYCBPQ99417 103 aaPredicted RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 SRRTQ9BXP5 876 aaKnown RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 PDE11AQ9HCR9 933 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 SPTLC2O15270 562 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 CTSWP56202 376 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 MTX1Q13505 466 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 PUM3Q15397 648 aaKnown RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 PARD6BQ9BYG5 372 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
CCND1-201ENST00000227507 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
CCND1-201ENST00000227507 KCNQ2O43526 872 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 ERLIN1O75477 346 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 CYP7A1P22680 504 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 PDE6BP35913 854 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 TIMM10P62072 90 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 GOLGA1Q92805 767 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 UFL1O94874 794 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 TTC31Q49AM3 519 aaPredicted RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 EFCAB8A8MWE9 144 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 ZNF202O95125 648 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 SYKP43405 635 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 E2F4Q16254 413 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 BAG1Q99933 345 aaPredicted RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
CCND1-201ENST00000227507 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
CCND1-201ENST00000227507 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 CD163L1Q9NR16 1453 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 MYO1BO43795 1136 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
CCND1-201ENST00000227507 RCOR1Q9UKL0 485 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 SPECC1Q5M775 1068 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
CCND1-201ENST00000227507 ZNF444Q8N0Y2 327 aaPredicted RBP13.11□□□□□ -0.31
CCND1-201ENST00000227507 MARCH10Q8NA82 808 aaPredicted RBP13.11□□□□□ -0.31
CCND1-201ENST00000227507 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
CCND1-201ENST00000227507 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
CCND1-201ENST00000227507 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 PPP2R2CQ9Y2T4 447 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
CCND1-201ENST00000227507 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
CCND1-201ENST00000227507 POLA2Q14181 598 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 PPFIBP1Q86W92 1011 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 IQCA1Q86XH1 822 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 CLSTN1O94985 981 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 ICE2Q659A1 982 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
CCND1-201ENST00000227507 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
CCND1-201ENST00000227507 KIF5CO60282 957 aa13.09□□□□□ -0.31
CCND1-201ENST00000227507 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
CCND1-201ENST00000227507 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
CCND1-201ENST00000227507 HIBADHP31937 336 aaKnown RBP13.09□□□□□ -0.31
CCND1-201ENST00000227507 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
CCND1-201ENST00000227507 LPIN2Q92539 896 aa13.09□□□□□ -0.31
CCND1-201ENST00000227507 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
CCND1-201ENST00000227507 IRX2Q9BZI1 471 aaPredicted RBP13.09□□□□□ -0.31
CCND1-201ENST00000227507 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
CCND1-201ENST00000227507 TAF5LO75529 589 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms