RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CGNQ9P2M7 1197 aaKnown RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 CRKLP46109 303 aaKnown RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 DENND2AQ9ULE3 1009 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 LDHCP07864 332 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 CASQ1P31415 396 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 DPCR1Q3MIW9 517 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 RRAGBQ5VZM2 374 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 INCENPQ9NQS7 918 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 ARHGAP23Q9P227 1491 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 KRT18P05783 430 aaKnown RBP14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 CHRNDQ07001 517 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 KIF4BQ2VIQ3 1234 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 TANGO6Q9C0B7 1094 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 MPHOSPH10O00566 681 aaKnown RBP14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 BMP15O95972 392 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 PRKCSHP14314 528 aaPredicted RBP14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 CMA1P23946 247 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 PPARAQ07869 468 aa14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 CACTINQ8WUQ7 758 aaKnown RBP14.11□□□□□ -0.15
TM9SF4-201ENST00000217315 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 USP17L12C9JPN9 530 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 USP17L21D6R901 530 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 HIBADHP31937 336 aaKnown RBP14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 TMCO3Q6UWJ1 677 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 SLIT1O75093 1534 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 CALM1P0DP23 149 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 CALM2P0DP24 149 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 CALM3P0DP25 149 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 EPS15P42566 896 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 KIF23Q02241 960 aaPredicted RBP14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 RASGRF1Q13972 1273 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 NOSTRINQ8IVI9 506 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 CDCA7Q9BWT1 371 aaPredicted RBP14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 RTCBQ9Y3I0 505 aaKnown RBP14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 DLG5Q8TDM6 1919 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 KIF5CO60282 957 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 STAMQ92783 540 aa14.1□□□□□ -0.15
TM9SF4-201ENST00000217315 HSP90B2PQ58FF3 399 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 TRMT44Q8IYL2 757 aaKnown RBP14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 FANCBQ8NB91 859 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 TCP11L1Q9NUJ3 509 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 NFE2L3Q9Y4A8 694 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 A0A1W2PQ27 194 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 A0A1W2PQ64 194 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 A0A1W2PQD8 194 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 SLU7O95391 586 aaKnown RBP14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 SUSD4Q5VX71 490 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 NOC3LQ8WTT2 800 aaKnown RBP14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 NYXQ9GZU5 481 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 DEF6Q9H4E7 631 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 C3P01024 1663 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 SLC39A14Q15043 492 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNF827Q17R98 1081 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 PLIN2Q99541 437 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 TNKSO95271 1327 aa14.09□□□□□ -0.15
TM9SF4-201ENST00000217315 STAT6P42226 847 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 LRRC8AQ8IWT6 810 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 SMARCC2Q8TAQ2 1214 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 CCDC12Q8WUD4 166 aaPredicted RBP14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 MRFAP1L1Q96HT8 127 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 ALDH8A1Q9H2A2 487 aaPredicted RBP14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 UBR1Q8IWV7 1749 aa14.08□□□□□ -0.15
TM9SF4-201ENST00000217315 IDEP14735 1019 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 TBC1D10CQ8IV04 446 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 BCL2L12Q9HB09 334 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 LMTK3Q96Q04 1460 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 MON2Q7Z3U7 1717 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 F8W031 263 aaPredicted RBP14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 LDHBP07195 334 aaKnown RBP14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 PIK3AP1Q6ZUJ8 805 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 STRBPQ96SI9 672 aaKnown RBP14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
TM9SF4-201ENST00000217315 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 EXOSC10Q01780 885 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 POSTNQ15063 836 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 KIAA1328Q86T90 577 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 GOLPH3LQ9H4A5 285 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 MEGF6O75095 1541 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 TRIM28Q13263 835 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 KCNB2Q92953 911 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 RFX7Q2KHR2 1363 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 KARSQ15046 597 aaKnown RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 MAPK8IP1Q9UQF2 711 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
TM9SF4-201ENST00000217315 IQUBQ8NA54 791 aa14.06□□□□□ -0.16
TM9SF4-201ENST00000217315 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms