RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 KRT83P78385 493 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 SMTNP53814 917 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 GNA11P29992 359 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 NECAB1Q8N987 351 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 SAT1P21673 171 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
HS3ST1-201ENST00000002596 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 MGARPQ8TDB4 240 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 TOM1O60784 492 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 KRT3P12035 628 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 SESN3P58005 492 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 RAPGEF1Q13905 1077 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 TBCCQ15814 346 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 TTC30AQ86WT1 665 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.2
HS3ST1-201ENST00000002596 NOLC1Q14978 699 aaKnown RBP eCLIP13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 JADE1Q6IE81 842 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 EYA3Q99504 573 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 VCX3AQ9NNX9 186 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 FAM76AQ8TAV0 307 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 UVSSAQ2YD98 709 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 DDX21Q9NR30 783 aaKnown RBP eCLIP13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 MAGEB6P1A0A0J9YX57 407 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
HS3ST1-201ENST00000002596 KRT2P35908 639 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 DHX58Q96C10 678 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 M0QZ92 97 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 FAM200AQ8TCP9 573 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 GBP5Q96PP8 586 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 H0YC42 278 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 KRBA2Q6ZNG9 492 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 STK25O00506 426 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 VAV2P52735 878 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 ITKQ08881 620 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 FOXO3O43524 673 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 GSTA1P08263 222 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 GSTA2P09210 222 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 TRPC3Q13507 836 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 SEL1L2Q5TEA6 688 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
HS3ST1-201ENST00000002596 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 SKOR1P84550 965 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 ARHGAP42A6NI28 874 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 ATP5J2-PTCD1G3V325 749 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 ABTB1Q969K4 478 aaPredicted RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 SPC25Q9HBM1 224 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
HS3ST1-201ENST00000002596 SERPINI2O75830 405 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 SLC12A2P55011 1212 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 IVNS1ABPQ9Y6Y0 642 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 PLIN2Q99541 437 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 DNAJC25Q9H1X3 360 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 HAUS8Q9BT25 410 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 TRIM31Q9BZY9 425 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 ARHGEF10LQ9HCE6 1279 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 PFDN1O60925 122 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 ZSCAN22P10073 491 aaPredicted RBP13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 SLFN5Q08AF3 891 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 TRIM56Q9BRZ2 755 aaKnown RBP13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 GIMAP4Q9NUV9 329 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 I3L4J1 428 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 BIRC3Q13489 604 aa13.74□□□□□ -0.21
HS3ST1-201ENST00000002596 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms