RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Pcdhb14Q6PB90 796 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Tet3Q8BG87 1668 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Adamtsl3G3UXC7 1706 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Dlg5E9Q9R9 1921 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Kiaa1524Q8BWY9 907 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Homer1Q9Z2Y3 366 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Robo1O89026 1612 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Als2Q920R0 1651 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Smarcc1P97496 1104 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Brinp3Q499E0 766 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Slc14a2Q8R4T9 930 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 RarsQ9D0I9 660 aaKnown RBP13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Ube3bQ9ES34 1070 aa13.84□□□□□ -0.19
Herc4-208ENSMUST00000219577 Rims2Q9EQZ7 1530 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cyp3a59D3Z2W7 503 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 GmnnO88513 206 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Pde11aP0C1Q2 933 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Fnbp4Q6ZQ03 1031 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tcp11l1Q8BTG3 509 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ercc4Q9QZD4 917 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Sorbs3Q9R1Z8 733 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ktn1Q61595 1327 aaKnown RBP13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 1700029H14RikE9PY36 240 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Znf496Q5SXI5 585 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Usp50Q6P8X6 390 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Vnn1Q9Z0K8 512 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Serpinb6bO08804 377 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Olfm5Q8BU90 496 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tktl2Q9D4D4 627 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Klhl10Q9D5V2 608 aa13.83□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tbc1d8bA3KGB4 1114 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Actn3O88990 900 aaKnown RBP13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Slc7a3P70423 618 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Prl2c1Q5SVL9 228 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tmco3Q8BH01 678 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Fam193aQ8CGI1 1231 aaKnown RBP13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Myl6bQ8CI43 207 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Zeb2Q9R0G7 1215 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Sel1lQ9Z2G6 790 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Grin2dQ03391 1323 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Lekr1B2RVN1 116 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Epha2Q03145 977 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Plbd2Q3TCN2 594 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Fchsd1Q6PFY1 688 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tbc1d5Q80XQ2 815 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Wdr3Q8BHB4 942 aaKnown RBP13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Trim29Q8R2Q0 587 aa13.82□□□□□ -0.2
Herc4-208ENSMUST00000219577 Sycp2lA0A0M3U1B0 842 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Gm4340L7N2C4 268 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Celf1P28659 486 aaKnown RBP13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Islr2Q5RKR3 745 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Csrnp2Q8BGQ2 534 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Wasf1Q8R5H6 559 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ndufb9Q9CQJ8 179 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Mon2Q80TL7 1715 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Secisbp2lQ6A098 1086 aaKnown RBP13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Znf532Q6NXK2 1036 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ctdp1Q7TSG2 960 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Znf131Q8K3J5 619 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cdc27A2A6Q5 825 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Phldb3E9QAF4 648 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 ItpripQ3TNL8 555 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ankrd1Q9CR42 319 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 4930548H24RikQ9D496 437 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Stk39Q9Z1W9 556 aa13.81□□□□□ -0.2
Herc4-208ENSMUST00000219577 Jakmip2D3YXK0 820 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Rbm15bQ6PHZ5 887 aaKnown RBP13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cyp4f39Q8BGU0 532 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Kri1Q8VDQ9 704 aaKnown RBP13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Krt23Q99PS0 422 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Slc27a1Q60714 646 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ccdc12Q8R344 166 aaKnown RBP13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ampd3O08739 766 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 MpndQ3TV65 487 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tmem109Q3UBX0 243 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Pnpla2Q8BJ56 486 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cnpy3Q9DAU1 276 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 FliiQ9JJ28 1271 aa13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Hic2Q9JLZ6 619 aaKnown RBP13.8□□□□□ -0.2
Herc4-208ENSMUST00000219577 Izumo3A6PWV3 263 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cdk4P30285 303 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Irx2P81066 474 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cnnm2Q3TWN3 875 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Klf15Q9EPW2 415 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Cyp4x1Q6A152 507 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ube3cQ80U95 1083 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Rnf41Q8BH75 317 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Maats1Q8BRC6 783 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Ano2Q8CFW1 1002 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 2310002L09RikQ9D7L5 217 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Lonp2Q9DBN5 852 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Plcb3P51432 1234 aaKnown RBP13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 RragbQ6NTA4 374 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Tekt3Q6X6Z7 490 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Spag5Q7TME2 1165 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Slc39a11Q8BWY7 342 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Terb1Q8C0V1 768 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Mylk2Q8VCR8 613 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Znf704Q9ERQ3 566 aa13.79□□□□□ -0.2
Herc4-208ENSMUST00000219577 Setdb1O88974 1307 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms