RNA–Protein interactions for RNA: ENSMUST00000147044.3

Trim3-205, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-205ENSMUST00000147044 Nfe2l3Q9WTM4 660 aa17.34■□□□□ 0.37
Trim3-205ENSMUST00000147044 Spata31d1bE9QA57 1361 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Ccdc173A0JLY1 547 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Ctr9Q62018 1173 aaKnown RBP17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Krt40Q6IFX3 439 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Ehd2Q8BH64 543 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Sirt2Q8VDQ8 389 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Srgap1Q91Z69 1062 aa17.33■□□□□ 0.37
Trim3-205ENSMUST00000147044 Lama4P97927 1816 aa17.33■□□□□ 0.36
Trim3-205ENSMUST00000147044 A0A1W2P7S8 802 aa17.33■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cacnb3P54285 484 aa17.33■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cdc5lQ6A068 802 aaKnown RBP17.33■□□□□ 0.36
Trim3-205ENSMUST00000147044 Gtf2iQ9ESZ8 998 aaKnown RBP17.33■□□□□ 0.36
Trim3-205ENSMUST00000147044 Fbxl16A2RT62 479 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Glg1Q61543 1175 aaKnown RBP17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Rbm28Q8CGC6 750 aaKnown RBP17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Mical1Q8VDP3 1048 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Pcdhb22Q91XZ8 794 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Krtap5-3Q9D226 196 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 WtapQ9ER69 396 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ep400Q8CHI8 3072 aaKnown RBP17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Gm20425E9Q035 978 aaKnown RBP17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Gm3893E9Q1I1 302 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cfap73J3QPZ5 306 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Bin1O08539 588 aaKnown RBP17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Eif6O55135 245 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 SrprbP47758 269 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Gpr101Q80T62 511 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Terb1Q8C0V1 768 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Washc1Q8VDD8 475 aa17.32■□□□□ 0.36
Trim3-205ENSMUST00000147044 Naaladl2A0A0N4SUJ3 795 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 LyarQ08288 388 aaKnown RBP17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 CtcfQ61164 736 aaKnown RBP17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Prr16A3KMN5 304 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cd3dP04235 173 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ptpn12P35831 775 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Atp6v1aP50516 617 aaKnown RBP17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Csrnp1P59054 583 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Fam196bQ6GQV1 535 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Bap1Q99PU7 728 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Usp34Q6ZQ93 3582 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Myh15E9Q264 1925 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Tcof1O08784 1320 aaKnown RBP17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cplx1P63040 134 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Q3TYL0 343 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Il17raQ60943 864 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Olfr118Q7TRJ6 321 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Epha10Q8BYG9 1007 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 St5Q924W7 1134 aa17.31■□□□□ 0.36
Trim3-205ENSMUST00000147044 Wdr33Q8K4P0 1330 aaKnown RBP17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Myh7Q91Z83 1935 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cfap99A0A140LIX9 648 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 MsnP26041 577 aaKnown RBP17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ehmt1Q5DW34 1296 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Pnma3Q8JZW8 466 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Adam1bQ8R534 806 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Trim59Q922Y2 403 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Hps4Q99KG7 671 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cxcl11Q9JHH5 100 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Sh3bgrQ9WUZ7 214 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 1700113H08RikE9Q9Q5 327 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Rc3h1Q4VGL6 1130 aaKnown RBP17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Eme2Q56A04 373 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Large2Q5XPT3 690 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Tbc1d30Q69ZT9 766 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ccp110Q7TSH4 1004 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 HdlbpQ8VDJ3 1268 aaKnown RBP17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 C4bP01029 1738 aa17.3■□□□□ 0.36
Trim3-205ENSMUST00000147044 1700003F12RikA2AKE5 210 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Adcy5P84309 1262 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Gtf2f1Q3THK3 508 aaKnown RBP17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 TnmdQ9EP64 317 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Duox1A2AQ92 1551 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Med23Q80YQ2 1367 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Psd3Q2PFD7 1037 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Fhdc1Q3ULZ2 1149 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Strip1Q8C079 837 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ndufb9Q9CQJ8 179 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 Lrp5Q91VN0 1614 aa17.29■□□□□ 0.36
Trim3-205ENSMUST00000147044 MycbpapQ5SUV2 932 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Adck5Q80V03 582 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Lrrc15Q80X72 579 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Ndufv1Q91YT0 464 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Plch1Q4KWH5 1682 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Grin1P35438 938 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Nup98Q6PFD9 1816 aaKnown RBP17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Prr29B1ARI9 187 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Casp12O08736 419 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Stk38Q91VJ4 465 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Cnpy3Q9DAU1 276 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Slfn1Q9Z0I7 337 aa17.28■□□□□ 0.36
Trim3-205ENSMUST00000147044 Usp25P57080 1055 aa17.27■□□□□ 0.36
Trim3-205ENSMUST00000147044 Madcam1Q61826 405 aa17.27■□□□□ 0.36
Trim3-205ENSMUST00000147044 Pus7lQ8CE46 702 aa17.27■□□□□ 0.36
Trim3-205ENSMUST00000147044 Hip1rQ9JKY5 1068 aa17.27■□□□□ 0.36
Trim3-205ENSMUST00000147044 Col22a1E9Q7P1 1613 aa17.27■□□□□ 0.36
Trim3-205ENSMUST00000147044 Aknad1E9Q8N6 675 aa17.27■□□□□ 0.35
Trim3-205ENSMUST00000147044 TrdnE9Q9K5 693 aa17.27■□□□□ 0.35
Trim3-205ENSMUST00000147044 Znf653Q6YND2 615 aa17.27■□□□□ 0.35
Trim3-205ENSMUST00000147044 Fam114a1Q9D281 569 aa17.27■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms