RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Dact3Q0PHV7 610 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ccdc160Q3UYG1 323 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Add3Q9QYB5 706 aaKnown RBP11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Palm3A2TJV2 734 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Proca1B0QZF7 307 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Sept7O55131 436 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Dnm2P39054 870 aaKnown RBP11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Caprin2Q05A80 1031 aaKnown RBP11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 HellsQ60848 821 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Zfp113Q8C689 439 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 BicraF8VPZ9 1578 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Adgrb2Q8CGM1 1561 aa11.31□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Usp19Q3UJD6 1360 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Prl3d3A0A0M6L0J6 224 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ces1aE9PYP1 563 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Krt90E9Q1Z0 538 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Eef2P58252 858 aaKnown RBP11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Nrbp1Q99J45 535 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Dctpp1Q9QY93 170 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Krt71Q9R0H5 524 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm15262A0A140LIQ5 728 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ctnna1P26231 906 aaKnown RBP11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 GphnQ8BUV3 769 aaKnown RBP11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Appbp2Q9DAX9 585 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cfap74Q3UY96 1578 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ttll7A4Q9F0 912 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm10563F6WIE4 79 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Krt18P05784 423 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 P4ha1Q60715 534 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Mphosph6Q9D1Q1 161 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ankrd2Q9WV06 328 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm9992B2RWK3 458 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ccdc174Q3U155 467 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Unc93aQ710D3 458 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cgref1Q8R1U2 281 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ubac1Q8VDI7 409 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Usp5P56399 858 aaKnown RBP11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cct6bQ61390 531 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Asic2Q925H0 512 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tulp1Q9Z273 543 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tex13c2A0A0G2JGA3 530 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cnksr1A2A9K7 700 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm10110D3Z5M2 615 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Brd2Q7JJ13 798 aaKnown RBP11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Abcb6Q9DC29 842 aa11.3□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Gm43638A0A0J9YU36 694 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Lmnb2P21619 596 aaKnown RBP11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Znf394Q9Z1D9 521 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Naip7Q9JIB3 1402 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Scaf11E9PZM7 1456 aaKnown RBP11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Irf5P56477 497 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 MpndQ3TV65 487 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Acbd5Q5XG73 508 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Msh6P54276 1358 aaKnown RBP11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Pet2A2AHY8 747 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Nedd9O35177 833 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Anks6Q6GQX6 883 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Dnm3Q8BZ98 863 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Ifih1Q8R5F7 1025 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 CactinQ9CS00 772 aaKnown RBP11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tmtc2Q56A06 836 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cyp7a1Q64505 503 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cep104Q80V31 926 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 NelfbQ8C4Y3 580 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Lin9Q8C735 542 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Desi2Q9D291 194 aa11.29□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Abcb4P21440 1276 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rbm19Q8R3C6 952 aaKnown RBP11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 TnnQ80Z71 1560 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Tldc2A2ACG1 198 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Mdh1P14152 334 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Fam207aP58468 219 aaKnown RBP11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 GptQ8QZR5 496 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 ChkbO55229 394 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Aifm3Q3TY86 605 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Olfm5Q8BU90 496 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Vps33aQ9D2N9 598 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Cetn3O35648 167 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 D130040H23RikQ8BII3 405 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Vps52Q8C754 723 aaKnown RBP11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Atp6v0a2P15920 856 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Skap1Q3UUV5 355 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Vps41Q5KU39 853 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 TnksQ6PFX9 1320 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Bach1P97302 739 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Clasp2Q8BRT1 1286 aaKnown RBP11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Rint1Q8BZ36 792 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 9230110C19RikQ8CC70 267 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Bag2Q91YN9 210 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 EcsitQ9QZH6 435 aa11.28□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Znf365Q8BG89 408 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Dtnbp1Q91WZ8 352 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 PpardP35396 440 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Klhl7Q8BUL5 586 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Atp2a1Q8R429 994 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 1700109H08RikQ9D9C0 210 aa11.27□□□□□ -0.6
Ubr1-201ENSMUST00000028728 Vps54Q5SPW0 977 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Camsap3Q80VC9 1252 aa11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lonp1Q8CGK3 949 aaKnown RBP11.27□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Prc1Q99K43 603 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms