RNA–Protein interactions for RNA: ENST00000641968.1

CASC19-271, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 842 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-271ENST00000641968 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
CASC19-271ENST00000641968 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
CASC19-271ENST00000641968 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
CASC19-271ENST00000641968 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
CASC19-271ENST00000641968 GABBR2O75899 941 aa12.26□□□□□ -0.45
CASC19-271ENST00000641968 GSE1Q14687 1217 aa12.25□□□□□ -0.45
CASC19-271ENST00000641968 PYGBP11216 843 aa12.22□□□□□ -0.45
CASC19-271ENST00000641968 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
CASC19-271ENST00000641968 MAP3K13O43283 966 aa12.19□□□□□ -0.46
CASC19-271ENST00000641968 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
CASC19-271ENST00000641968 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
CASC19-271ENST00000641968 CLCN6P51797 869 aa12.15□□□□□ -0.46
CASC19-271ENST00000641968 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
CASC19-271ENST00000641968 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
CASC19-271ENST00000641968 PKD2Q13563 968 aa12.09□□□□□ -0.47
CASC19-271ENST00000641968 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
CASC19-271ENST00000641968 TRPC6Q9Y210 931 aa12.08□□□□□ -0.48
CASC19-271ENST00000641968 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
CASC19-271ENST00000641968 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
CASC19-271ENST00000641968 TRIM41Q8WV44 630 aa12.05□□□□□ -0.48
CASC19-271ENST00000641968 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
CASC19-271ENST00000641968 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
CASC19-271ENST00000641968 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
CASC19-271ENST00000641968 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
CASC19-271ENST00000641968 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
CASC19-271ENST00000641968 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
CASC19-271ENST00000641968 RGL2O15211 777 aa11.94□□□□□ -0.5
CASC19-271ENST00000641968 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
CASC19-271ENST00000641968 TIE1P35590 1138 aa11.94□□□□□ -0.5
CASC19-271ENST00000641968 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
CASC19-271ENST00000641968 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
CASC19-271ENST00000641968 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
CASC19-271ENST00000641968 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
CASC19-271ENST00000641968 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
CASC19-271ENST00000641968 PSEN1P49768 467 aa11.91□□□□□ -0.5
CASC19-271ENST00000641968 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
CASC19-271ENST00000641968 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
CASC19-271ENST00000641968 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
CASC19-271ENST00000641968 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
CASC19-271ENST00000641968 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
CASC19-271ENST00000641968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
CASC19-271ENST00000641968 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
CASC19-271ENST00000641968 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
CASC19-271ENST00000641968 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
CASC19-271ENST00000641968 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
CASC19-271ENST00000641968 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
CASC19-271ENST00000641968 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
CASC19-271ENST00000641968 STK25O00506 426 aa11.75□□□□□ -0.53
CASC19-271ENST00000641968 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
CASC19-271ENST00000641968 C7P10643 843 aa11.75□□□□□ -0.53
CASC19-271ENST00000641968 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
CASC19-271ENST00000641968 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
CASC19-271ENST00000641968 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
CASC19-271ENST00000641968 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
CASC19-271ENST00000641968 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
CASC19-271ENST00000641968 IER5LQ5T953 404 aa11.7□□□□□ -0.54
CASC19-271ENST00000641968 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
CASC19-271ENST00000641968 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
CASC19-271ENST00000641968 SEC24BO95487 1268 aa11.69□□□□□ -0.54
CASC19-271ENST00000641968 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
CASC19-271ENST00000641968 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
CASC19-271ENST00000641968 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
CASC19-271ENST00000641968 PLCG2P16885 1265 aa11.64□□□□□ -0.55
CASC19-271ENST00000641968 HS6ST3Q8IZP7 471 aa11.64□□□□□ -0.55
CASC19-271ENST00000641968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
CASC19-271ENST00000641968 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
CASC19-271ENST00000641968 LHX8Q68G74 356 aa11.62□□□□□ -0.55
CASC19-271ENST00000641968 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
CASC19-271ENST00000641968 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
CASC19-271ENST00000641968 SOX12O15370 315 aa11.58□□□□□ -0.56
CASC19-271ENST00000641968 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
CASC19-271ENST00000641968 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
CASC19-271ENST00000641968 ILDR1Q86SU0 546 aaPredicted RBP11.57□□□□□ -0.56
CASC19-271ENST00000641968 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
CASC19-271ENST00000641968 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
CASC19-271ENST00000641968 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
CASC19-271ENST00000641968 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
CASC19-271ENST00000641968 NLRP6P59044 892 aa11.51□□□□□ -0.57
CASC19-271ENST00000641968 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
CASC19-271ENST00000641968 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
CASC19-271ENST00000641968 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
CASC19-271ENST00000641968 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
CASC19-271ENST00000641968 PPP1R37O75864 691 aa11.42□□□□□ -0.58
CASC19-271ENST00000641968 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
CASC19-271ENST00000641968 SCUBE2Q9NQ36 999 aa11.42□□□□□ -0.58
CASC19-271ENST00000641968 G3V3G9 751 aa11.41□□□□□ -0.58
CASC19-271ENST00000641968 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
CASC19-271ENST00000641968 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
CASC19-271ENST00000641968 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
CASC19-271ENST00000641968 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
CASC19-271ENST00000641968 TMEM121BQ9BXQ6 578 aaPredicted RBP11.37□□□□□ -0.59
CASC19-271ENST00000641968 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
CASC19-271ENST00000641968 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
CASC19-271ENST00000641968 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
CASC19-271ENST00000641968 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
CASC19-271ENST00000641968 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
CASC19-271ENST00000641968 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
CASC19-271ENST00000641968 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
CASC19-271ENST00000641968 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
CASC19-271ENST00000641968 C2orf72A6NCS6 295 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms