RNA–Protein interactions for RNA: ENST00000641944.1

CASC19-267, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,117 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-267ENST00000641944 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
CASC19-267ENST00000641944 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
CASC19-267ENST00000641944 RGL2O15211 777 aa11.61□□□□□ -0.55
CASC19-267ENST00000641944 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
CASC19-267ENST00000641944 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
CASC19-267ENST00000641944 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
CASC19-267ENST00000641944 GABBR2O75899 941 aa11.57□□□□□ -0.56
CASC19-267ENST00000641944 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
CASC19-267ENST00000641944 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
CASC19-267ENST00000641944 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
CASC19-267ENST00000641944 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
CASC19-267ENST00000641944 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
CASC19-267ENST00000641944 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
CASC19-267ENST00000641944 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
CASC19-267ENST00000641944 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CASC19-267ENST00000641944 GSE1Q14687 1217 aa11.44□□□□□ -0.58
CASC19-267ENST00000641944 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
CASC19-267ENST00000641944 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
CASC19-267ENST00000641944 BCANQ96GW7 911 aa11.43□□□□□ -0.58
CASC19-267ENST00000641944 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
CASC19-267ENST00000641944 CLCN6P51797 869 aa11.41□□□□□ -0.58
CASC19-267ENST00000641944 NUBP1P53384 320 aa11.39□□□□□ -0.59
CASC19-267ENST00000641944 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
CASC19-267ENST00000641944 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CASC19-267ENST00000641944 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CASC19-267ENST00000641944 CCDC61Q9Y6R9 512 aa11.36□□□□□ -0.59
CASC19-267ENST00000641944 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
CASC19-267ENST00000641944 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
CASC19-267ENST00000641944 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
CASC19-267ENST00000641944 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
CASC19-267ENST00000641944 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
CASC19-267ENST00000641944 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
CASC19-267ENST00000641944 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
CASC19-267ENST00000641944 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
CASC19-267ENST00000641944 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
CASC19-267ENST00000641944 MAP3K13O43283 966 aa11.22□□□□□ -0.61
CASC19-267ENST00000641944 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
CASC19-267ENST00000641944 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
CASC19-267ENST00000641944 STK25O00506 426 aa11.18□□□□□ -0.62
CASC19-267ENST00000641944 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
CASC19-267ENST00000641944 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
CASC19-267ENST00000641944 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
CASC19-267ENST00000641944 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
CASC19-267ENST00000641944 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
CASC19-267ENST00000641944 PYGBP11216 843 aa11.13□□□□□ -0.63
CASC19-267ENST00000641944 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
CASC19-267ENST00000641944 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
CASC19-267ENST00000641944 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
CASC19-267ENST00000641944 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
CASC19-267ENST00000641944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 IFNL1Q8IU54 200 aa11.1□□□□□ -0.63
CASC19-267ENST00000641944 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CASC19-267ENST00000641944 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
CASC19-267ENST00000641944 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
CASC19-267ENST00000641944 TIE1P35590 1138 aa11.08□□□□□ -0.64
CASC19-267ENST00000641944 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CASC19-267ENST00000641944 POTEMA6NI47 508 aa11.05□□□□□ -0.64
CASC19-267ENST00000641944 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
CASC19-267ENST00000641944 NBR1Q14596 966 aa11.04□□□□□ -0.64
CASC19-267ENST00000641944 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
CASC19-267ENST00000641944 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
CASC19-267ENST00000641944 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
CASC19-267ENST00000641944 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
CASC19-267ENST00000641944 OTUD5Q96G74 571 aa11□□□□□ -0.65
CASC19-267ENST00000641944 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
CASC19-267ENST00000641944 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
CASC19-267ENST00000641944 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
CASC19-267ENST00000641944 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
CASC19-267ENST00000641944 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
CASC19-267ENST00000641944 C7P10643 843 aa10.97□□□□□ -0.65
CASC19-267ENST00000641944 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
CASC19-267ENST00000641944 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CASC19-267ENST00000641944 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
CASC19-267ENST00000641944 IER5LQ5T953 404 aa10.88□□□□□ -0.67
CASC19-267ENST00000641944 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
CASC19-267ENST00000641944 SEC24BO95487 1268 aa10.86□□□□□ -0.67
CASC19-267ENST00000641944 PSEN1P49768 467 aa10.86□□□□□ -0.67
CASC19-267ENST00000641944 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
CASC19-267ENST00000641944 PLCG2P16885 1265 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
CASC19-267ENST00000641944 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 MFRPQ9BY79 579 aa10.8□□□□□ -0.68
CASC19-267ENST00000641944 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
CASC19-267ENST00000641944 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
CASC19-267ENST00000641944 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
CASC19-267ENST00000641944 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
CASC19-267ENST00000641944 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
CASC19-267ENST00000641944 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
CASC19-267ENST00000641944 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
CASC19-267ENST00000641944 SOX12O15370 315 aa10.71□□□□□ -0.69
CASC19-267ENST00000641944 NLRP6P59044 892 aa10.71□□□□□ -0.69
CASC19-267ENST00000641944 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms