RNA–Protein interactions for RNA: ENST00000641912.1

CASC19-264, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,184 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-264ENST00000641912 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
CASC19-264ENST00000641912 POTEB2H3BUK9 544 aa13.32□□□□□ -0.28
CASC19-264ENST00000641912 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
CASC19-264ENST00000641912 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
CASC19-264ENST00000641912 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
CASC19-264ENST00000641912 C7P10643 843 aa13.29□□□□□ -0.28
CASC19-264ENST00000641912 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
CASC19-264ENST00000641912 MIER1Q8N108 512 aa13.25□□□□□ -0.29
CASC19-264ENST00000641912 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
CASC19-264ENST00000641912 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
CASC19-264ENST00000641912 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
CASC19-264ENST00000641912 POTEMA6NI47 508 aa13.15□□□□□ -0.3
CASC19-264ENST00000641912 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
CASC19-264ENST00000641912 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
CASC19-264ENST00000641912 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CASC19-264ENST00000641912 MAP3K13O43283 966 aa13.12□□□□□ -0.31
CASC19-264ENST00000641912 TIE1P35590 1138 aa13.12□□□□□ -0.31
CASC19-264ENST00000641912 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
CASC19-264ENST00000641912 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
CASC19-264ENST00000641912 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
CASC19-264ENST00000641912 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
CASC19-264ENST00000641912 TRPC6Q9Y210 931 aa13.07□□□□□ -0.32
CASC19-264ENST00000641912 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
CASC19-264ENST00000641912 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
CASC19-264ENST00000641912 SEC24BO95487 1268 aa13.01□□□□□ -0.33
CASC19-264ENST00000641912 PCDHB13Q9Y5F0 798 aa13□□□□□ -0.33
CASC19-264ENST00000641912 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
CASC19-264ENST00000641912 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
CASC19-264ENST00000641912 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
CASC19-264ENST00000641912 NUBP1P53384 320 aa12.95□□□□□ -0.34
CASC19-264ENST00000641912 IER5LQ5T953 404 aa12.95□□□□□ -0.34
CASC19-264ENST00000641912 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
CASC19-264ENST00000641912 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
CASC19-264ENST00000641912 FKBP8Q14318 412 aa12.92□□□□□ -0.34
CASC19-264ENST00000641912 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
CASC19-264ENST00000641912 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
CASC19-264ENST00000641912 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
CASC19-264ENST00000641912 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
CASC19-264ENST00000641912 PLCG2P16885 1265 aa12.82□□□□□ -0.36
CASC19-264ENST00000641912 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
CASC19-264ENST00000641912 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
CASC19-264ENST00000641912 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
CASC19-264ENST00000641912 PYGBP11216 843 aa12.73□□□□□ -0.37
CASC19-264ENST00000641912 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
CASC19-264ENST00000641912 OCEL1Q9H607 264 aa12.68□□□□□ -0.38
CASC19-264ENST00000641912 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CASC19-264ENST00000641912 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
CASC19-264ENST00000641912 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
CASC19-264ENST00000641912 GSE1Q14687 1217 aa12.64□□□□□ -0.39
CASC19-264ENST00000641912 ST18O60284 1047 aa12.63□□□□□ -0.39
CASC19-264ENST00000641912 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
CASC19-264ENST00000641912 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
CASC19-264ENST00000641912 SNPHO15079 494 aa12.59□□□□□ -0.39
CASC19-264ENST00000641912 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
CASC19-264ENST00000641912 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
CASC19-264ENST00000641912 TMEM121BQ9BXQ6 578 aaPredicted RBP12.55□□□□□ -0.4
CASC19-264ENST00000641912 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
CASC19-264ENST00000641912 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.41
CASC19-264ENST00000641912 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
CASC19-264ENST00000641912 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
CASC19-264ENST00000641912 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
CASC19-264ENST00000641912 PSEN1P49768 467 aa12.46□□□□□ -0.41
CASC19-264ENST00000641912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.427e-8■□□□□ 10.2
CASC19-264ENST00000641912 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
CASC19-264ENST00000641912 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
CASC19-264ENST00000641912 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
CASC19-264ENST00000641912 ABCC9O60706 1549 aa12.37□□□□□ -0.43
CASC19-264ENST00000641912 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
CASC19-264ENST00000641912 G3V3G9 751 aa12.36□□□□□ -0.43
CASC19-264ENST00000641912 EMP3P54852 163 aa12.36□□□□□ -0.43
CASC19-264ENST00000641912 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
CASC19-264ENST00000641912 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
CASC19-264ENST00000641912 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
CASC19-264ENST00000641912 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
CASC19-264ENST00000641912 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
CASC19-264ENST00000641912 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
CASC19-264ENST00000641912 BOLA1Q9Y3E2 137 aa12.26□□□□□ -0.45
CASC19-264ENST00000641912 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
CASC19-264ENST00000641912 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
CASC19-264ENST00000641912 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
CASC19-264ENST00000641912 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
CASC19-264ENST00000641912 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
CASC19-264ENST00000641912 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
CASC19-264ENST00000641912 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
CASC19-264ENST00000641912 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
CASC19-264ENST00000641912 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
CASC19-264ENST00000641912 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
CASC19-264ENST00000641912 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
CASC19-264ENST00000641912 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
CASC19-264ENST00000641912 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
CASC19-264ENST00000641912 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
CASC19-264ENST00000641912 ERBB3P21860 1342 aa12.08□□□□□ -0.48
CASC19-264ENST00000641912 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
CASC19-264ENST00000641912 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
CASC19-264ENST00000641912 SOX12O15370 315 aa12.02□□□□□ -0.49
CASC19-264ENST00000641912 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
CASC19-264ENST00000641912 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
CASC19-264ENST00000641912 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
CASC19-264ENST00000641912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.97□□□□□ -0.49
CASC19-264ENST00000641912 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms