RNA–Protein interactions for RNA: ENST00000641719.1

CASC19-254, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-254ENST00000641719 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
CASC19-254ENST00000641719 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
CASC19-254ENST00000641719 MS4A3Q96HJ5 214 aa17.38■□□□□ 0.37
CASC19-254ENST00000641719 RASEFQ8IZ41 740 aa17.36■□□□□ 0.37
CASC19-254ENST00000641719 KIF12Q96FN5 646 aa17.36■□□□□ 0.37
CASC19-254ENST00000641719 ASTLQ6HA08 431 aaPredicted RBP17.35■□□□□ 0.37
CASC19-254ENST00000641719 NUBP1P53384 320 aa17.29■□□□□ 0.36
CASC19-254ENST00000641719 SGIP1Q9BQI5 828 aa17.29■□□□□ 0.36
CASC19-254ENST00000641719 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
CASC19-254ENST00000641719 ATMINO43313 823 aaPredicted RBP17.26■□□□□ 0.35
CASC19-254ENST00000641719 SLC39A7Q92504 469 aa17.23■□□□□ 0.35
CASC19-254ENST00000641719 C7P10643 843 aa17.22■□□□□ 0.35
CASC19-254ENST00000641719 FAM212AQ96EL1 285 aa17.21■□□□□ 0.35
CASC19-254ENST00000641719 MAP3K13O43283 966 aa17.21■□□□□ 0.34
CASC19-254ENST00000641719 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.34
CASC19-254ENST00000641719 TIE1P35590 1138 aa17.19■□□□□ 0.34
CASC19-254ENST00000641719 METRNQ9UJH8 293 aa17.13■□□□□ 0.33
CASC19-254ENST00000641719 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
CASC19-254ENST00000641719 VASPP50552 380 aaPredicted RBP17.1■□□□□ 0.33
CASC19-254ENST00000641719 ATN1P54259 1190 aaPredicted RBP17.1■□□□□ 0.33
CASC19-254ENST00000641719 PCDHB13Q9Y5F0 798 aa17.08■□□□□ 0.32
CASC19-254ENST00000641719 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
CASC19-254ENST00000641719 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
CASC19-254ENST00000641719 TRPC6Q9Y210 931 aa17.02■□□□□ 0.31
CASC19-254ENST00000641719 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
CASC19-254ENST00000641719 MAMSTRQ6ZN01 415 aa17.01■□□□□ 0.31
CASC19-254ENST00000641719 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
CASC19-254ENST00000641719 IER5LQ5T953 404 aa16.96■□□□□ 0.31
CASC19-254ENST00000641719 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
CASC19-254ENST00000641719 GSE1Q14687 1217 aa16.96■□□□□ 0.3
CASC19-254ENST00000641719 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
CASC19-254ENST00000641719 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
CASC19-254ENST00000641719 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
CASC19-254ENST00000641719 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
CASC19-254ENST00000641719 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
CASC19-254ENST00000641719 PYGBP11216 843 aa16.84■□□□□ 0.29
CASC19-254ENST00000641719 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
CASC19-254ENST00000641719 SEC24BO95487 1268 aa16.83■□□□□ 0.28
CASC19-254ENST00000641719 TMEM106CQ9BVX2 250 aa16.83■□□□□ 0.28
CASC19-254ENST00000641719 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
CASC19-254ENST00000641719 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
CASC19-254ENST00000641719 SPOCK2Q92563 424 aa16.77■□□□□ 0.27
CASC19-254ENST00000641719 IFNLR1Q8IU57 520 aaPredicted RBP16.75■□□□□ 0.27
CASC19-254ENST00000641719 COLQQ9Y215 455 aaPredicted RBP16.75■□□□□ 0.27
CASC19-254ENST00000641719 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
CASC19-254ENST00000641719 PLCG2P16885 1265 aa16.67■□□□□ 0.26
CASC19-254ENST00000641719 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
CASC19-254ENST00000641719 OCEL1Q9H607 264 aa16.62■□□□□ 0.25
CASC19-254ENST00000641719 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
CASC19-254ENST00000641719 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
CASC19-254ENST00000641719 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
CASC19-254ENST00000641719 PDAP1Q13442 181 aaKnown RBP16.53■□□□□ 0.24
CASC19-254ENST00000641719 POTEMA6NI47 508 aa16.53■□□□□ 0.24
CASC19-254ENST00000641719 PSEN1P49768 467 aa16.53■□□□□ 0.24
CASC19-254ENST00000641719 GOLGA2Q08379 1002 aa16.52■□□□□ 0.23
CASC19-254ENST00000641719 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
CASC19-254ENST00000641719 PCDH10Q9P2E7 1040 aa16.5■□□□□ 0.23
CASC19-254ENST00000641719 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
CASC19-254ENST00000641719 SLAIN1Q8ND83 568 aa16.44■□□□□ 0.22
CASC19-254ENST00000641719 PDCD7Q8N8D1 485 aaKnown RBP16.43■□□□□ 0.22
CASC19-254ENST00000641719 LCE2DQ5TA82 110 aaPredicted RBP16.42■□□□□ 0.22
CASC19-254ENST00000641719 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
CASC19-254ENST00000641719 ILDR1Q86SU0 546 aaPredicted RBP16.41■□□□□ 0.22
CASC19-254ENST00000641719 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
CASC19-254ENST00000641719 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.37■□□□□ 0.21
CASC19-254ENST00000641719 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
CASC19-254ENST00000641719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.217e-8■□□□□ 10.2
CASC19-254ENST00000641719 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
CASC19-254ENST00000641719 SNPHO15079 494 aa16.31■□□□□ 0.2
CASC19-254ENST00000641719 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
CASC19-254ENST00000641719 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
CASC19-254ENST00000641719 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.19
CASC19-254ENST00000641719 TMEM121BQ9BXQ6 578 aaPredicted RBP16.23■□□□□ 0.19
CASC19-254ENST00000641719 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
CASC19-254ENST00000641719 PLSCR2Q9NRY7 297 aa16.2■□□□□ 0.18
CASC19-254ENST00000641719 ST18O60284 1047 aa16.19■□□□□ 0.18
CASC19-254ENST00000641719 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
CASC19-254ENST00000641719 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
CASC19-254ENST00000641719 G3V3G9 751 aa16.15■□□□□ 0.18
CASC19-254ENST00000641719 BOLA1Q9Y3E2 137 aa16.15■□□□□ 0.18
CASC19-254ENST00000641719 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
CASC19-254ENST00000641719 SOX12O15370 315 aa16.12■□□□□ 0.17
CASC19-254ENST00000641719 ABCC9O60706 1549 aa16.11■□□□□ 0.17
CASC19-254ENST00000641719 EFCAB3Q8N7B9 438 aa16.11■□□□□ 0.17
CASC19-254ENST00000641719 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
CASC19-254ENST00000641719 NACADO15069 1562 aa16.08■□□□□ 0.16
CASC19-254ENST00000641719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.06■□□□□ 0.16
CASC19-254ENST00000641719 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CASC19-254ENST00000641719 CDAN1Q8IWY9 1227 aa16.03■□□□□ 0.16
CASC19-254ENST00000641719 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
CASC19-254ENST00000641719 MICALL2Q8IY33 904 aa15.91■□□□□ 0.14
CASC19-254ENST00000641719 NLRP6P59044 892 aa15.9■□□□□ 0.14
CASC19-254ENST00000641719 MS4A4AQ96JQ5 239 aa15.89■□□□□ 0.13
CASC19-254ENST00000641719 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
CASC19-254ENST00000641719 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
CASC19-254ENST00000641719 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
CASC19-254ENST00000641719 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
CASC19-254ENST00000641719 DOK7Q18PE1 504 aa15.86■□□□□ 0.13
CASC19-254ENST00000641719 HOXB3P14651 431 aaPredicted RBP15.85■□□□□ 0.13
CASC19-254ENST00000641719 EMP3P54852 163 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms