RNA–Protein interactions for RNA: ENST00000641260.1

SAMMSON-210, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,308 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-210ENST00000641260 PHF12Q96QT6 1004 aa9.95□□□□□ -0.82
SAMMSON-210ENST00000641260 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
SAMMSON-210ENST00000641260 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
SAMMSON-210ENST00000641260 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
SAMMSON-210ENST00000641260 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
SAMMSON-210ENST00000641260 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
SAMMSON-210ENST00000641260 CENPBP07199 599 aaPredicted RBP9.82□□□□□ -0.84
SAMMSON-210ENST00000641260 POTEMA6NI47 508 aa9.82□□□□□ -0.84
SAMMSON-210ENST00000641260 MS4A3Q96HJ5 214 aa9.8□□□□□ -0.84
SAMMSON-210ENST00000641260 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
SAMMSON-210ENST00000641260 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SAMMSON-210ENST00000641260 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
SAMMSON-210ENST00000641260 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
SAMMSON-210ENST00000641260 C7P10643 843 aa9.76□□□□□ -0.85
SAMMSON-210ENST00000641260 SLC39A7Q92504 469 aa9.76□□□□□ -0.85
SAMMSON-210ENST00000641260 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
SAMMSON-210ENST00000641260 EHMT2Q96KQ7 1210 aa9.73□□□□□ -0.85
SAMMSON-210ENST00000641260 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
SAMMSON-210ENST00000641260 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
SAMMSON-210ENST00000641260 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
SAMMSON-210ENST00000641260 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
SAMMSON-210ENST00000641260 ATN1P54259 1190 aaPredicted RBP9.66□□□□□ -0.86
SAMMSON-210ENST00000641260 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
SAMMSON-210ENST00000641260 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
SAMMSON-210ENST00000641260 PROM2Q8N271 834 aa9.63□□□□□ -0.87
SAMMSON-210ENST00000641260 KIF12Q96FN5 646 aa9.63□□□□□ -0.87
SAMMSON-210ENST00000641260 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
SAMMSON-210ENST00000641260 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
SAMMSON-210ENST00000641260 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
SAMMSON-210ENST00000641260 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
SAMMSON-210ENST00000641260 POTEFA5A3E0 1075 aa9.58□□□□□ -0.88
SAMMSON-210ENST00000641260 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
SAMMSON-210ENST00000641260 MAP3K13O43283 966 aa9.56□□□□□ -0.88
SAMMSON-210ENST00000641260 TIE1P35590 1138 aa9.56□□□□□ -0.88
SAMMSON-210ENST00000641260 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
SAMMSON-210ENST00000641260 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
SAMMSON-210ENST00000641260 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
SAMMSON-210ENST00000641260 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
SAMMSON-210ENST00000641260 MIER1Q8N108 512 aa9.53□□□□□ -0.88
SAMMSON-210ENST00000641260 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
SAMMSON-210ENST00000641260 SEC24BO95487 1268 aa9.5□□□□□ -0.89
SAMMSON-210ENST00000641260 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
SAMMSON-210ENST00000641260 NACADO15069 1562 aa9.49□□□□□ -0.89
SAMMSON-210ENST00000641260 ANP32EQ9BTT0 268 aa9.49□□□□□ -0.89
SAMMSON-210ENST00000641260 ACIN1Q9UKV3 1341 aaKnown RBP9.48□□□□□ -0.89
SAMMSON-210ENST00000641260 TRIM35Q9UPQ4 493 aa9.44□□□□□ -0.9
SAMMSON-210ENST00000641260 IER5LQ5T953 404 aa9.43□□□□□ -0.9
SAMMSON-210ENST00000641260 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
SAMMSON-210ENST00000641260 PCDHB13Q9Y5F0 798 aa9.43□□□□□ -0.9
SAMMSON-210ENST00000641260 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
SAMMSON-210ENST00000641260 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.9
SAMMSON-210ENST00000641260 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
SAMMSON-210ENST00000641260 UBE2Q2Q8WVN8 375 aa9.4□□□□□ -0.9
SAMMSON-210ENST00000641260 RANGAP1P46060 587 aaPredicted RBP9.38□□□□□ -0.91
SAMMSON-210ENST00000641260 NUBP1P53384 320 aa9.36□□□□□ -0.91
SAMMSON-210ENST00000641260 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
SAMMSON-210ENST00000641260 SLAIN1Q8ND83 568 aa9.36□□□□□ -0.91
SAMMSON-210ENST00000641260 ZBTB47Q9UFB7 747 aaPredicted RBP9.35□□□□□ -0.91
SAMMSON-210ENST00000641260 ST18O60284 1047 aa9.33□□□□□ -0.92
SAMMSON-210ENST00000641260 TMEM106CQ9BVX2 250 aa9.33□□□□□ -0.92
SAMMSON-210ENST00000641260 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
SAMMSON-210ENST00000641260 PLCG2P16885 1265 aa9.32□□□□□ -0.92
SAMMSON-210ENST00000641260 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
SAMMSON-210ENST00000641260 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
SAMMSON-210ENST00000641260 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
SAMMSON-210ENST00000641260 ZCCHC6Q5VYS8 1495 aaKnown RBP9.3□□□□□ -0.92
SAMMSON-210ENST00000641260 IRX5P78411 483 aaPredicted RBP9.28□□□□□ -0.92
SAMMSON-210ENST00000641260 ARXQ96QS3 562 aa9.28□□□□□ -0.92
SAMMSON-210ENST00000641260 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
SAMMSON-210ENST00000641260 UNC13AQ9UPW8 1703 aa9.26□□□□□ -0.93
SAMMSON-210ENST00000641260 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
SAMMSON-210ENST00000641260 DCAF8L2P0C7V8 631 aa9.25□□□□□ -0.93
SAMMSON-210ENST00000641260 ERICH6BQ5W0A0 696 aa9.25□□□□□ -0.93
SAMMSON-210ENST00000641260 BICRAQ9NZM4 1560 aa9.24□□□□□ -0.93
SAMMSON-210ENST00000641260 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
SAMMSON-210ENST00000641260 OCEL1Q9H607 264 aa9.23□□□□□ -0.93
SAMMSON-210ENST00000641260 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
SAMMSON-210ENST00000641260 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
SAMMSON-210ENST00000641260 SNPHO15079 494 aa9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 PYGBP11216 843 aa9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 PCGF6Q9BYE7 350 aa9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 PODXL2Q9NZ53 605 aa9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
SAMMSON-210ENST00000641260 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
SAMMSON-210ENST00000641260 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
SAMMSON-210ENST00000641260 PCDHB8Q9UN66 801 aa9.17□□□□□ -0.94
SAMMSON-210ENST00000641260 MARVELD3Q96A59 401 aa9.16□□□□□ -0.94
SAMMSON-210ENST00000641260 NEFLP07196 543 aa9.15□□□□□ -0.94
SAMMSON-210ENST00000641260 FKBP8Q14318 412 aa9.12□□□□□ -0.95
SAMMSON-210ENST00000641260 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
SAMMSON-210ENST00000641260 SCRIBQ14160 1630 aa9.11□□□□□ -0.95
SAMMSON-210ENST00000641260 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
SAMMSON-210ENST00000641260 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
SAMMSON-210ENST00000641260 EMP3P54852 163 aa9.06□□□□□ -0.96
SAMMSON-210ENST00000641260 GOLGA2Q08379 1002 aa9.06□□□□□ -0.96
SAMMSON-210ENST00000641260 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
SAMMSON-210ENST00000641260 MKRN3Q13064 507 aaKnown RBP9.05□□□□□ -0.96
SAMMSON-210ENST00000641260 ZNF467Q7Z7K2 595 aaPredicted RBP9.05□□□□□ -0.96
SAMMSON-210ENST00000641260 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms