RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
RTTN-220ENST00000640654 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
RTTN-220ENST00000640654 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
RTTN-220ENST00000640654 C7P10643 843 aa12.6□□□□□ -0.39
RTTN-220ENST00000640654 MIER1Q8N108 512 aa12.59□□□□□ -0.39
RTTN-220ENST00000640654 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
RTTN-220ENST00000640654 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
RTTN-220ENST00000640654 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
RTTN-220ENST00000640654 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
RTTN-220ENST00000640654 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
RTTN-220ENST00000640654 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
RTTN-220ENST00000640654 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
RTTN-220ENST00000640654 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
RTTN-220ENST00000640654 POTEMA6NI47 508 aa12.45□□□□□ -0.42
RTTN-220ENST00000640654 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
RTTN-220ENST00000640654 MAP3K13O43283 966 aa12.44□□□□□ -0.42
RTTN-220ENST00000640654 TIE1P35590 1138 aa12.44□□□□□ -0.42
RTTN-220ENST00000640654 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
RTTN-220ENST00000640654 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
RTTN-220ENST00000640654 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
RTTN-220ENST00000640654 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
RTTN-220ENST00000640654 SEC24BO95487 1268 aa12.36□□□□□ -0.43
RTTN-220ENST00000640654 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
RTTN-220ENST00000640654 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
RTTN-220ENST00000640654 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
RTTN-220ENST00000640654 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
RTTN-220ENST00000640654 PCDH10Q9P2E7 1040 aa12.31□□□□□ -0.44
RTTN-220ENST00000640654 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
RTTN-220ENST00000640654 NUBP1P53384 320 aa12.28□□□□□ -0.44
RTTN-220ENST00000640654 FKBP8Q14318 412 aa12.28□□□□□ -0.44
RTTN-220ENST00000640654 IER5LQ5T953 404 aa12.28□□□□□ -0.44
RTTN-220ENST00000640654 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
RTTN-220ENST00000640654 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
RTTN-220ENST00000640654 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
RTTN-220ENST00000640654 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
RTTN-220ENST00000640654 TMEM106CQ9BVX2 250 aa12.2□□□□□ -0.46
RTTN-220ENST00000640654 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
RTTN-220ENST00000640654 PLCG2P16885 1265 aa12.16□□□□□ -0.46
RTTN-220ENST00000640654 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
RTTN-220ENST00000640654 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
RTTN-220ENST00000640654 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
RTTN-220ENST00000640654 PYGBP11216 843 aa12.09□□□□□ -0.47
RTTN-220ENST00000640654 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
RTTN-220ENST00000640654 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
RTTN-220ENST00000640654 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
RTTN-220ENST00000640654 GSE1Q14687 1217 aa12.01□□□□□ -0.49
RTTN-220ENST00000640654 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
RTTN-220ENST00000640654 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
RTTN-220ENST00000640654 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
RTTN-220ENST00000640654 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
RTTN-220ENST00000640654 ST18O60284 1047 aa11.97□□□□□ -0.49
RTTN-220ENST00000640654 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
RTTN-220ENST00000640654 SNPHO15079 494 aa11.96□□□□□ -0.49
RTTN-220ENST00000640654 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
RTTN-220ENST00000640654 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
RTTN-220ENST00000640654 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
RTTN-220ENST00000640654 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
RTTN-220ENST00000640654 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
RTTN-220ENST00000640654 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
RTTN-220ENST00000640654 PSEN1P49768 467 aa11.83□□□□□ -0.52
RTTN-220ENST00000640654 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
RTTN-220ENST00000640654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
RTTN-220ENST00000640654 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
RTTN-220ENST00000640654 G3V3G9 751 aa11.76□□□□□ -0.53
RTTN-220ENST00000640654 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
RTTN-220ENST00000640654 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
RTTN-220ENST00000640654 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
RTTN-220ENST00000640654 EMP3P54852 163 aa11.72□□□□□ -0.53
RTTN-220ENST00000640654 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
RTTN-220ENST00000640654 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
RTTN-220ENST00000640654 MMRN1Q13201 1228 aa11.66□□□□□ -0.54
RTTN-220ENST00000640654 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
RTTN-220ENST00000640654 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
RTTN-220ENST00000640654 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
RTTN-220ENST00000640654 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
RTTN-220ENST00000640654 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
RTTN-220ENST00000640654 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
RTTN-220ENST00000640654 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
RTTN-220ENST00000640654 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
RTTN-220ENST00000640654 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
RTTN-220ENST00000640654 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
RTTN-220ENST00000640654 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
RTTN-220ENST00000640654 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
RTTN-220ENST00000640654 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
RTTN-220ENST00000640654 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
RTTN-220ENST00000640654 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
RTTN-220ENST00000640654 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
RTTN-220ENST00000640654 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
RTTN-220ENST00000640654 ERBB3P21860 1342 aa11.46□□□□□ -0.57
RTTN-220ENST00000640654 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
RTTN-220ENST00000640654 SOX12O15370 315 aa11.42□□□□□ -0.58
RTTN-220ENST00000640654 MICALL2Q8IY33 904 aa11.41□□□□□ -0.58
RTTN-220ENST00000640654 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
RTTN-220ENST00000640654 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
RTTN-220ENST00000640654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
RTTN-220ENST00000640654 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
RTTN-220ENST00000640654 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
RTTN-220ENST00000640654 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
RTTN-220ENST00000640654 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
RTTN-220ENST00000640654 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms