RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
RBM39-245ENST00000639702 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
RBM39-245ENST00000639702 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
RBM39-245ENST00000639702 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
RBM39-245ENST00000639702 KCNH8Q96L42 1107 aa16.21■□□□□ 0.18
RBM39-245ENST00000639702 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
RBM39-245ENST00000639702 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
RBM39-245ENST00000639702 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
RBM39-245ENST00000639702 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
RBM39-245ENST00000639702 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
RBM39-245ENST00000639702 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
RBM39-245ENST00000639702 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
RBM39-245ENST00000639702 ZBTB7CA1YPR0 619 aa16.14■□□□□ 0.17
RBM39-245ENST00000639702 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
RBM39-245ENST00000639702 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
RBM39-245ENST00000639702 A0A0G2JS52 829 aa16.12■□□□□ 0.17
RBM39-245ENST00000639702 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
RBM39-245ENST00000639702 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
RBM39-245ENST00000639702 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
RBM39-245ENST00000639702 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
RBM39-245ENST00000639702 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.17
RBM39-245ENST00000639702 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.17
RBM39-245ENST00000639702 BECN1Q14457 450 aa16.08■□□□□ 0.16
RBM39-245ENST00000639702 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
RBM39-245ENST00000639702 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
RBM39-245ENST00000639702 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
RBM39-245ENST00000639702 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
RBM39-245ENST00000639702 ANP32EQ9BTT0 268 aa16.03■□□□□ 0.16
RBM39-245ENST00000639702 CARD11Q9BXL7 1154 aa16.02■□□□□ 0.16
RBM39-245ENST00000639702 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
RBM39-245ENST00000639702 NUDCQ9Y266 331 aa16.02■□□□□ 0.15
RBM39-245ENST00000639702 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
RBM39-245ENST00000639702 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
RBM39-245ENST00000639702 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
RBM39-245ENST00000639702 KANK1Q14678 1352 aa15.99■□□□□ 0.15
RBM39-245ENST00000639702 CHMP4BQ9H444 224 aaKnown RBP15.99■□□□□ 0.15
RBM39-245ENST00000639702 MIER1Q8N108 512 aa15.98■□□□□ 0.15
RBM39-245ENST00000639702 POGKQ9P215 609 aa15.98■□□□□ 0.15
RBM39-245ENST00000639702 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
RBM39-245ENST00000639702 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
RBM39-245ENST00000639702 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
RBM39-245ENST00000639702 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
RBM39-245ENST00000639702 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
RBM39-245ENST00000639702 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.15
RBM39-245ENST00000639702 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
RBM39-245ENST00000639702 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
RBM39-245ENST00000639702 NBR1Q14596 966 aa15.94■□□□□ 0.14
RBM39-245ENST00000639702 MS4A1P11836 297 aa15.93■□□□□ 0.14
RBM39-245ENST00000639702 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
RBM39-245ENST00000639702 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
RBM39-245ENST00000639702 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
RBM39-245ENST00000639702 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
RBM39-245ENST00000639702 ARXQ96QS3 562 aa15.89■□□□□ 0.13
RBM39-245ENST00000639702 TMF1P82094 1093 aa15.87■□□□□ 0.13
RBM39-245ENST00000639702 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
RBM39-245ENST00000639702 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
RBM39-245ENST00000639702 TRIM44Q96DX7 344 aaPredicted RBP15.85■□□□□ 0.13
RBM39-245ENST00000639702 CUX2O14529 1486 aa15.84■□□□□ 0.13
RBM39-245ENST00000639702 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
RBM39-245ENST00000639702 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.13
RBM39-245ENST00000639702 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
RBM39-245ENST00000639702 NPHP1O15259 732 aa15.8■□□□□ 0.12
RBM39-245ENST00000639702 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
RBM39-245ENST00000639702 MYO15BQ96JP2 1530 aa15.79■□□□□ 0.12
RBM39-245ENST00000639702 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
RBM39-245ENST00000639702 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
RBM39-245ENST00000639702 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
RBM39-245ENST00000639702 CC2D1BQ5T0F9 858 aaKnown RBP15.77■□□□□ 0.11
RBM39-245ENST00000639702 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
RBM39-245ENST00000639702 DCAF11Q8TEB1 546 aa15.76■□□□□ 0.11
RBM39-245ENST00000639702 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
RBM39-245ENST00000639702 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
RBM39-245ENST00000639702 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
RBM39-245ENST00000639702 PTMAP06454 111 aaKnown RBP15.75■□□□□ 0.11
RBM39-245ENST00000639702 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
RBM39-245ENST00000639702 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
RBM39-245ENST00000639702 SIN3AQ96ST3 1273 aa15.74■□□□□ 0.11
RBM39-245ENST00000639702 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
RBM39-245ENST00000639702 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
RBM39-245ENST00000639702 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
RBM39-245ENST00000639702 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
RBM39-245ENST00000639702 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
RBM39-245ENST00000639702 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
RBM39-245ENST00000639702 MORC1Q86VD1 984 aa15.71■□□□□ 0.11
RBM39-245ENST00000639702 HDGFL2Q7Z4V5 671 aaPredicted RBP15.71■□□□□ 0.1
RBM39-245ENST00000639702 FGD1P98174 961 aa15.7■□□□□ 0.1
RBM39-245ENST00000639702 KCNJ4P48050 445 aa15.68■□□□□ 0.1
RBM39-245ENST00000639702 HSP90AB1P08238 724 aaKnown RBP15.68■□□□□ 0.1
RBM39-245ENST00000639702 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
RBM39-245ENST00000639702 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
RBM39-245ENST00000639702 MLECQ14165 292 aa15.67■□□□□ 0.1
RBM39-245ENST00000639702 MCCP23508 829 aa15.67■□□□□ 0.1
RBM39-245ENST00000639702 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
RBM39-245ENST00000639702 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
RBM39-245ENST00000639702 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
RBM39-245ENST00000639702 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
RBM39-245ENST00000639702 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
RBM39-245ENST00000639702 RGS3P49796 1198 aa15.65■□□□□ 0.1
RBM39-245ENST00000639702 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
RBM39-245ENST00000639702 SOGA1O94964 1423 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms