RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CREBZFQ9NS37 354 aa7.16□□□□□ -1.26
LMBR1-222ENST00000638959 CDAN1Q8IWY9 1227 aa7.15□□□□□ -1.26
LMBR1-222ENST00000638959 ASTLQ6HA08 431 aaPredicted RBP7.14□□□□□ -1.27
LMBR1-222ENST00000638959 ATMINO43313 823 aaPredicted RBP7.12□□□□□ -1.27
LMBR1-222ENST00000638959 MS4A3Q96HJ5 214 aa7.1□□□□□ -1.27
LMBR1-222ENST00000638959 STAG3Q9UJ98 1225 aa7.05□□□□□ -1.28
LMBR1-222ENST00000638959 NPM1P06748 294 aaKnown RBP eCLIP7.04□□□□□ -1.28
LMBR1-222ENST00000638959 ATN1P54259 1190 aaPredicted RBP7.03□□□□□ -1.28
LMBR1-222ENST00000638959 MMRN1Q13201 1228 aa7.03□□□□□ -1.28
LMBR1-222ENST00000638959 POTEFA5A3E0 1075 aa6.98□□□□□ -1.29
LMBR1-222ENST00000638959 SPNS2Q8IVW8 549 aa6.98□□□□□ -1.29
LMBR1-222ENST00000638959 ST18O60284 1047 aa6.95□□□□□ -1.3
LMBR1-222ENST00000638959 SEC24BO95487 1268 aa6.94□□□□□ -1.3
LMBR1-222ENST00000638959 MNX1P50219 401 aaPredicted RBP6.94□□□□□ -1.3
LMBR1-222ENST00000638959 BMP2KQ9NSY1 1161 aaPredicted RBP6.93□□□□□ -1.3
LMBR1-222ENST00000638959 TSPYL2Q9H2G4 693 aaPredicted RBP6.92□□□□□ -1.3
LMBR1-222ENST00000638959 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
LMBR1-222ENST00000638959 COLQQ9Y215 455 aaPredicted RBP6.9□□□□□ -1.3
LMBR1-222ENST00000638959 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
LMBR1-222ENST00000638959 TIE1P35590 1138 aa6.87□□□□□ -1.31
LMBR1-222ENST00000638959 CCDC61Q9Y6R9 512 aa6.87□□□□□ -1.31
LMBR1-222ENST00000638959 KIF12Q96FN5 646 aa6.86□□□□□ -1.31
LMBR1-222ENST00000638959 TTLL13PA6NNM8 815 aa6.82□□□□□ -1.32
LMBR1-222ENST00000638959 TMEM121BQ9BXQ6 578 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-222ENST00000638959 MAP3K13O43283 966 aa6.81□□□□□ -1.32
LMBR1-222ENST00000638959 MARVELD3Q96A59 401 aa6.81□□□□□ -1.32
LMBR1-222ENST00000638959 IER5LQ5T953 404 aa6.8□□□□□ -1.32
LMBR1-222ENST00000638959 TRIM35Q9UPQ4 493 aa6.8□□□□□ -1.32
LMBR1-222ENST00000638959 SPDYE4A6NLX3 237 aa6.79□□□□□ -1.32
LMBR1-222ENST00000638959 SNPHO15079 494 aa6.76□□□□□ -1.33
LMBR1-222ENST00000638959 PLCG2P16885 1265 aa6.75□□□□□ -1.33
LMBR1-222ENST00000638959 EMP3P54852 163 aa6.72□□□□□ -1.33
LMBR1-222ENST00000638959 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
LMBR1-222ENST00000638959 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
LMBR1-222ENST00000638959 PCDHB13Q9Y5F0 798 aa6.69□□□□□ -1.34
LMBR1-222ENST00000638959 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.68□□□□□ -1.34
LMBR1-222ENST00000638959 RASEFQ8IZ41 740 aa6.67□□□□□ -1.34
LMBR1-222ENST00000638959 HS3ST6Q96QI5 342 aa6.67□□□□□ -1.34
LMBR1-222ENST00000638959 FAM205CA6NFA0 338 aa6.66□□□□□ -1.34
LMBR1-222ENST00000638959 TMEM106CQ9BVX2 250 aa6.66□□□□□ -1.34
LMBR1-222ENST00000638959 IRX5P78411 483 aaPredicted RBP6.65□□□□□ -1.34
LMBR1-222ENST00000638959 SGIP1Q9BQI5 828 aa6.65□□□□□ -1.34
LMBR1-222ENST00000638959 POTEB3A0JP26 581 aa6.63□□□□□ -1.35
LMBR1-222ENST00000638959 PLEKHG5O94827 1062 aa6.63□□□□□ -1.35
LMBR1-222ENST00000638959 POTEBQ6S5H4 581 aa6.63□□□□□ -1.35
LMBR1-222ENST00000638959 IFNL1Q8IU54 200 aa6.61□□□□□ -1.35
LMBR1-222ENST00000638959 RNF166Q96A37 237 aaPredicted RBP6.61□□□□□ -1.35
LMBR1-222ENST00000638959 OCEL1Q9H607 264 aa6.6□□□□□ -1.35
LMBR1-222ENST00000638959 C3orf67Q6ZVT6 689 aa6.58□□□□□ -1.36
LMBR1-222ENST00000638959 MIER1Q8N108 512 aa6.56□□□□□ -1.36
LMBR1-222ENST00000638959 MYT1LQ9UL68 1186 aa6.52□□□□□ -1.37
LMBR1-222ENST00000638959 FAM212AQ96EL1 285 aa6.48□□□□□ -1.37
LMBR1-222ENST00000638959 PROM2Q8N271 834 aa6.47□□□□□ -1.37
LMBR1-222ENST00000638959 L3MBTL3Q96JM7 780 aaPredicted RBP6.47□□□□□ -1.37
LMBR1-222ENST00000638959 ERBB3P21860 1342 aa6.47□□□□□ -1.37
LMBR1-222ENST00000638959 PLCD3Q8N3E9 789 aa6.46□□□□□ -1.38
LMBR1-222ENST00000638959 PDCD7Q8N8D1 485 aaKnown RBP6.45□□□□□ -1.38
LMBR1-222ENST00000638959 NUBP1P53384 320 aa6.44□□□□□ -1.38
LMBR1-222ENST00000638959 ZNF710Q8N1W2 664 aa6.44□□□□□ -1.38
LMBR1-222ENST00000638959 GOLGA2Q08379 1002 aa6.43□□□□□ -1.38
LMBR1-222ENST00000638959 ZBTB47Q9UFB7 747 aaPredicted RBP6.43□□□□□ -1.38
LMBR1-222ENST00000638959 HOXB1P14653 301 aaPredicted RBP6.41□□□□□ -1.38
LMBR1-222ENST00000638959 MKRN3Q13064 507 aaKnown RBP6.41□□□□□ -1.38
LMBR1-222ENST00000638959 HOXB3P14651 431 aaPredicted RBP6.4□□□□□ -1.38
LMBR1-222ENST00000638959 VARS2Q5ST30 1063 aaKnown RBP6.4□□□□□ -1.38
LMBR1-222ENST00000638959 PCDHB8Q9UN66 801 aa6.4□□□□□ -1.38
LMBR1-222ENST00000638959 PYGBP11216 843 aa6.39□□□□□ -1.39
LMBR1-222ENST00000638959 PTGER2P43116 358 aa6.39□□□□□ -1.39
LMBR1-222ENST00000638959 CSRNP3Q8WYN3 585 aa6.39□□□□□ -1.39
LMBR1-222ENST00000638959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.38□□□□□ -1.39
LMBR1-222ENST00000638959 DOK7Q18PE1 504 aa6.37□□□□□ -1.39
LMBR1-222ENST00000638959 G3V3G9 751 aa6.36□□□□□ -1.39
LMBR1-222ENST00000638959 DCAF8Q5TAQ9 597 aa6.36□□□□□ -1.39
LMBR1-222ENST00000638959 PLA2G2EQ9NZK7 142 aa6.35□□□□□ -1.39
LMBR1-222ENST00000638959 RIMBP2O15034 1052 aa6.34□□□□□ -1.39
LMBR1-222ENST00000638959 ZNF687Q8N1G0 1237 aa6.33□□□□□ -1.4
LMBR1-222ENST00000638959 ANKRD13DQ6ZTN6 518 aa6.32□□□□□ -1.4
LMBR1-222ENST00000638959 BOLA1Q9Y3E2 137 aa6.3□□□□□ -1.4
LMBR1-222ENST00000638959 DPY19L2Q6NUT2 758 aa6.29□□□□□ -1.4
LMBR1-222ENST00000638959 ZNF467Q7Z7K2 595 aaPredicted RBP6.28□□□□□ -1.4
LMBR1-222ENST00000638959 PSEN1P49768 467 aa6.23□□□□□ -1.41
LMBR1-222ENST00000638959 ILDR1Q86SU0 546 aaPredicted RBP6.23□□□□□ -1.41
LMBR1-222ENST00000638959 ZSWIM6Q9HCJ5 1215 aa6.23□□□□□ -1.41
LMBR1-222ENST00000638959 HCSTQ9UBK5 93 aa6.23□□□□□ -1.41
LMBR1-222ENST00000638959 LSM11P83369 360 aaKnown RBP eCLIP6.22□□□□□ -1.41
LMBR1-222ENST00000638959 GPR153Q6NV75 609 aa6.2□□□□□ -1.42
LMBR1-222ENST00000638959 CABP2Q9NPB3 220 aa6.19□□□□□ -1.42
LMBR1-222ENST00000638959 IRX2Q9BZI1 471 aaPredicted RBP6.17□□□□□ -1.42
LMBR1-222ENST00000638959 ZNF316A6NFI3 1004 aaPredicted RBP6.15□□□□□ -1.42
LMBR1-222ENST00000638959 ARSIQ5FYB1 569 aa6.15□□□□□ -1.42
LMBR1-222ENST00000638959 PDAP1Q13442 181 aaKnown RBP6.14□□□□□ -1.43
LMBR1-222ENST00000638959 GSE1Q14687 1217 aa6.14□□□□□ -1.43
LMBR1-222ENST00000638959 PBX2P40425 430 aa6.12□□□□□ -1.43
LMBR1-222ENST00000638959 TMEM92Q6UXU6 159 aa6.12□□□□□ -1.43
LMBR1-222ENST00000638959 KHSRPQ92945 711 aaKnown RBP eCLIP6.11□□□□□ -1.43
LMBR1-222ENST00000638959 AXIN2Q9Y2T1 843 aa6.1□□□□□ -1.43
LMBR1-222ENST00000638959 CHRM1P11229 460 aaPredicted RBP6.09□□□□□ -1.43
LMBR1-222ENST00000638959 MICALL2Q8IY33 904 aa6.09□□□□□ -1.43
LMBR1-222ENST00000638959 EHMT2Q96KQ7 1210 aa6.09□□□□□ -1.43
LMBR1-222ENST00000638959 RGS20O76081 388 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms