RNA–Protein interactions for RNA: ENST00000637827.1

GABRA1-218, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 1,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-218ENST00000637827 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
GABRA1-218ENST00000637827 PROM2Q8N271 834 aa10□□□□□ -0.81
GABRA1-218ENST00000637827 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
GABRA1-218ENST00000637827 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
GABRA1-218ENST00000637827 MYT1Q01538 1121 aa9.95□□□□□ -0.82
GABRA1-218ENST00000637827 POLA2Q14181 598 aa9.95□□□□□ -0.82
GABRA1-218ENST00000637827 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
GABRA1-218ENST00000637827 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
GABRA1-218ENST00000637827 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
GABRA1-218ENST00000637827 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
GABRA1-218ENST00000637827 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
GABRA1-218ENST00000637827 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
GABRA1-218ENST00000637827 AKT1S1Q96B36 256 aa9.86□□□□□ -0.83
GABRA1-218ENST00000637827 UBTFP17480 764 aaKnown RBP9.84□□□□□ -0.83
GABRA1-218ENST00000637827 RGL2O15211 777 aa9.82□□□□□ -0.84
GABRA1-218ENST00000637827 HRCP23327 699 aa9.82□□□□□ -0.84
GABRA1-218ENST00000637827 CHGAP10645 457 aaKnown RBP9.81□□□□□ -0.84
GABRA1-218ENST00000637827 REM2Q8IYK8 340 aaPredicted RBP9.8□□□□□ -0.84
GABRA1-218ENST00000637827 MKRN4PQ13434 485 aaPredicted RBP9.79□□□□□ -0.84
GABRA1-218ENST00000637827 DNAJC5Q9H3Z4 198 aa9.79□□□□□ -0.84
GABRA1-218ENST00000637827 HAX1O00165 279 aa9.77□□□□□ -0.85
GABRA1-218ENST00000637827 BICRAQ9NZM4 1560 aa9.76□□□□□ -0.85
GABRA1-218ENST00000637827 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
GABRA1-218ENST00000637827 EVX2Q03828 476 aa9.72□□□□□ -0.85
GABRA1-218ENST00000637827 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
GABRA1-218ENST00000637827 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
GABRA1-218ENST00000637827 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
GABRA1-218ENST00000637827 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
GABRA1-218ENST00000637827 RSF1Q96T23 1441 aaPredicted RBP9.66□□□□□ -0.86
GABRA1-218ENST00000637827 CECR2Q9BXF3 1484 aa9.66□□□□□ -0.86
GABRA1-218ENST00000637827 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
GABRA1-218ENST00000637827 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
GABRA1-218ENST00000637827 EIF5BO60841 1220 aaKnown RBP9.63□□□□□ -0.87
GABRA1-218ENST00000637827 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
GABRA1-218ENST00000637827 MROH2BQ7Z745 1585 aa9.61□□□□□ -0.87
GABRA1-218ENST00000637827 HS6ST3Q8IZP7 471 aa9.61□□□□□ -0.87
GABRA1-218ENST00000637827 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
GABRA1-218ENST00000637827 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
GABRA1-218ENST00000637827 SMARCA4P51532 1647 aa9.59□□□□□ -0.87
GABRA1-218ENST00000637827 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.88
GABRA1-218ENST00000637827 MIER1Q8N108 512 aa9.59□□□□□ -0.88
GABRA1-218ENST00000637827 PLEKHG5O94827 1062 aa9.56□□□□□ -0.88
GABRA1-218ENST00000637827 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
GABRA1-218ENST00000637827 WIZO95785 1651 aa9.53□□□□□ -0.88
GABRA1-218ENST00000637827 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.89
GABRA1-218ENST00000637827 P3H3Q8IVL6 736 aa9.52□□□□□ -0.89
GABRA1-218ENST00000637827 BRPF1P55201 1214 aaPredicted RBP9.5□□□□□ -0.89
GABRA1-218ENST00000637827 LHX8Q68G74 356 aa9.46□□□□□ -0.9
GABRA1-218ENST00000637827 TOP2AP11388 1531 aaKnown RBP9.45□□□□□ -0.9
GABRA1-218ENST00000637827 C19orf67A6NJJ6 358 aa9.45□□□□□ -0.9
GABRA1-218ENST00000637827 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
GABRA1-218ENST00000637827 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
GABRA1-218ENST00000637827 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
GABRA1-218ENST00000637827 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-218ENST00000637827 SMARCA2P51531 1590 aa9.43□□□□□ -0.9
GABRA1-218ENST00000637827 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
GABRA1-218ENST00000637827 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
GABRA1-218ENST00000637827 ATAD2BQ9ULI0 1458 aa9.42□□□□□ -0.9
GABRA1-218ENST00000637827 GABBR2O75899 941 aa9.42□□□□□ -0.9
GABRA1-218ENST00000637827 PRKAR2AP13861 404 aaKnown RBP9.42□□□□□ -0.9
GABRA1-218ENST00000637827 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.91
GABRA1-218ENST00000637827 NEUROD2Q15784 382 aa9.4□□□□□ -0.91
GABRA1-218ENST00000637827 GSE1Q14687 1217 aa9.39□□□□□ -0.91
GABRA1-218ENST00000637827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
GABRA1-218ENST00000637827 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
GABRA1-218ENST00000637827 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
GABRA1-218ENST00000637827 STK25O00506 426 aa9.36□□□□□ -0.91
GABRA1-218ENST00000637827 NCAPD3P42695 1498 aa9.36□□□□□ -0.91
GABRA1-218ENST00000637827 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
GABRA1-218ENST00000637827 ARID3AQ99856 593 aa9.35□□□□□ -0.91
GABRA1-218ENST00000637827 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
GABRA1-218ENST00000637827 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
GABRA1-218ENST00000637827 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
GABRA1-218ENST00000637827 ZMYND15Q9H091 742 aa9.35□□□□□ -0.91
GABRA1-218ENST00000637827 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
GABRA1-218ENST00000637827 IGSF3O75054 1194 aa9.34□□□□□ -0.91
GABRA1-218ENST00000637827 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
GABRA1-218ENST00000637827 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
GABRA1-218ENST00000637827 NECTIN2Q92692 538 aa9.33□□□□□ -0.92
GABRA1-218ENST00000637827 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
GABRA1-218ENST00000637827 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
GABRA1-218ENST00000637827 C1orf115Q9H7X2 142 aa9.32□□□□□ -0.92
GABRA1-218ENST00000637827 SPDYE1Q8NFV5 336 aaPredicted RBP9.29□□□□□ -0.92
GABRA1-218ENST00000637827 CC2D2AQ9P2K1 1620 aa9.29□□□□□ -0.92
GABRA1-218ENST00000637827 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
GABRA1-218ENST00000637827 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
GABRA1-218ENST00000637827 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
GABRA1-218ENST00000637827 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
GABRA1-218ENST00000637827 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
GABRA1-218ENST00000637827 ZC3H15Q8WU90 426 aaKnown RBP9.24□□□□□ -0.93
GABRA1-218ENST00000637827 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
GABRA1-218ENST00000637827 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
GABRA1-218ENST00000637827 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
GABRA1-218ENST00000637827 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
GABRA1-218ENST00000637827 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
GABRA1-218ENST00000637827 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
GABRA1-218ENST00000637827 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
GABRA1-218ENST00000637827 CDK11BP21127 795 aaKnown RBP9.19□□□□□ -0.94
GABRA1-218ENST00000637827 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
GABRA1-218ENST00000637827 SGIP1Q9BQI5 828 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms