RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-222ENST00000637226 OTUD5Q96G74 571 aa6.29□□□□□ -1.4
GABRB3-222ENST00000637226 ATMINO43313 823 aaPredicted RBP6.28□□□□□ -1.4
GABRB3-222ENST00000637226 SLC39A7Q92504 469 aa6.28□□□□□ -1.4
GABRB3-222ENST00000637226 CCDC61Q9Y6R9 512 aa6.28□□□□□ -1.4
GABRB3-222ENST00000637226 METRNQ9UJH8 293 aa6.27□□□□□ -1.41
GABRB3-222ENST00000637226 C7P10643 843 aa6.26□□□□□ -1.41
GABRB3-222ENST00000637226 PLCD3Q8N3E9 789 aa6.26□□□□□ -1.41
GABRB3-222ENST00000637226 KIF12Q96FN5 646 aa6.25□□□□□ -1.41
GABRB3-222ENST00000637226 ATN1P54259 1190 aaPredicted RBP6.23□□□□□ -1.41
GABRB3-222ENST00000637226 MAP3K13O43283 966 aa6.22□□□□□ -1.41
GABRB3-222ENST00000637226 RASEFQ8IZ41 740 aa6.22□□□□□ -1.41
GABRB3-222ENST00000637226 PLSCR2Q9NRY7 297 aa6.22□□□□□ -1.41
GABRB3-222ENST00000637226 MAMSTRQ6ZN01 415 aa6.21□□□□□ -1.42
GABRB3-222ENST00000637226 ZBTB47Q9UFB7 747 aaPredicted RBP6.21□□□□□ -1.42
GABRB3-222ENST00000637226 BMP2KQ9NSY1 1161 aaPredicted RBP6.2□□□□□ -1.42
GABRB3-222ENST00000637226 TIE1P35590 1138 aa6.19□□□□□ -1.42
GABRB3-222ENST00000637226 TRPC6Q9Y210 931 aa6.19□□□□□ -1.42
GABRB3-222ENST00000637226 POTEMA6NI47 508 aa6.18□□□□□ -1.42
GABRB3-222ENST00000637226 POTEJP0CG39 1038 aa6.18□□□□□ -1.42
GABRB3-222ENST00000637226 SCUBE2Q9NQ36 999 aa6.18□□□□□ -1.42
GABRB3-222ENST00000637226 FKBP8Q14318 412 aa6.17□□□□□ -1.42
GABRB3-222ENST00000637226 SGIP1Q9BQI5 828 aa6.16□□□□□ -1.42
GABRB3-222ENST00000637226 PCDHB13Q9Y5F0 798 aa6.16□□□□□ -1.42
GABRB3-222ENST00000637226 TTLL13PA6NNM8 815 aa6.15□□□□□ -1.42
GABRB3-222ENST00000637226 SEC24BO95487 1268 aa6.15□□□□□ -1.42
GABRB3-222ENST00000637226 NUBP1P53384 320 aa6.15□□□□□ -1.42
GABRB3-222ENST00000637226 POTEGQ6S5H5 508 aa6.15□□□□□ -1.42
GABRB3-222ENST00000637226 POTEFA5A3E0 1075 aa6.14□□□□□ -1.43
GABRB3-222ENST00000637226 FAM212AQ96EL1 285 aa6.14□□□□□ -1.43
GABRB3-222ENST00000637226 FAM163AQ96GL9 167 aaPredicted RBP6.12□□□□□ -1.43
GABRB3-222ENST00000637226 TRIM35Q9UPQ4 493 aa6.12□□□□□ -1.43
GABRB3-222ENST00000637226 IER5LQ5T953 404 aa6.1□□□□□ -1.43
GABRB3-222ENST00000637226 DCAF8Q5TAQ9 597 aa6.1□□□□□ -1.43
GABRB3-222ENST00000637226 IFNL1Q8IU54 200 aa6.1□□□□□ -1.43
GABRB3-222ENST00000637226 COLQQ9Y215 455 aaPredicted RBP6.1□□□□□ -1.43
GABRB3-222ENST00000637226 TMEM106CQ9BVX2 250 aa6.09□□□□□ -1.43
GABRB3-222ENST00000637226 PCDH10Q9P2E7 1040 aa6.09□□□□□ -1.43
GABRB3-222ENST00000637226 FBXO3Q9UK99 471 aa6.09□□□□□ -1.43
GABRB3-222ENST00000637226 PYGBP11216 843 aa6.05□□□□□ -1.44
GABRB3-222ENST00000637226 PLCG2P16885 1265 aa6.05□□□□□ -1.44
GABRB3-222ENST00000637226 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
GABRB3-222ENST00000637226 KLHL34Q8N239 644 aa6.04□□□□□ -1.44
GABRB3-222ENST00000637226 SLAIN1Q8ND83 568 aa6.02□□□□□ -1.45
GABRB3-222ENST00000637226 IRX5P78411 483 aaPredicted RBP6.01□□□□□ -1.45
GABRB3-222ENST00000637226 PCDHB8Q9UN66 801 aa6.01□□□□□ -1.45
GABRB3-222ENST00000637226 GSE1Q14687 1217 aa6□□□□□ -1.45
GABRB3-222ENST00000637226 OCEL1Q9H607 264 aa6□□□□□ -1.45
GABRB3-222ENST00000637226 VASPP50552 380 aaPredicted RBP5.99□□□□□ -1.45
GABRB3-222ENST00000637226 ZNF467Q7Z7K2 595 aaPredicted RBP5.97□□□□□ -1.45
GABRB3-222ENST00000637226 ST18O60284 1047 aa5.96□□□□□ -1.46
GABRB3-222ENST00000637226 GOLGA2Q08379 1002 aa5.96□□□□□ -1.46
GABRB3-222ENST00000637226 CDAN1Q8IWY9 1227 aa5.96□□□□□ -1.46
GABRB3-222ENST00000637226 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.96□□□□□ -1.46
GABRB3-222ENST00000637226 MKRN3Q13064 507 aaKnown RBP5.95□□□□□ -1.46
GABRB3-222ENST00000637226 SNPHO15079 494 aa5.93□□□□□ -1.46
GABRB3-222ENST00000637226 CHRM1P11229 460 aaPredicted RBP5.93□□□□□ -1.46
GABRB3-222ENST00000637226 L3MBTL3Q96JM7 780 aaPredicted RBP5.92□□□□□ -1.46
GABRB3-222ENST00000637226 PSEN1P49768 467 aa5.91□□□□□ -1.46
GABRB3-222ENST00000637226 C3orf67Q6ZVT6 689 aa5.9□□□□□ -1.46
GABRB3-222ENST00000637226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.9□□□□□ -1.46
GABRB3-222ENST00000637226 CIZ1Q9ULV3 898 aaPredicted RBP5.9□□□□□ -1.46
GABRB3-222ENST00000637226 PDCD7Q8N8D1 485 aaKnown RBP5.89□□□□□ -1.47
GABRB3-222ENST00000637226 SPOCK2Q92563 424 aa5.89□□□□□ -1.47
GABRB3-222ENST00000637226 TMEM121BQ9BXQ6 578 aaPredicted RBP5.89□□□□□ -1.47
GABRB3-222ENST00000637226 PDAP1Q13442 181 aaKnown RBP5.88□□□□□ -1.47
GABRB3-222ENST00000637226 IFNLR1Q8IU57 520 aaPredicted RBP5.87□□□□□ -1.47
GABRB3-222ENST00000637226 G3V3G9 751 aa5.85□□□□□ -1.47
GABRB3-222ENST00000637226 MARVELD3Q96A59 401 aa5.85□□□□□ -1.47
GABRB3-222ENST00000637226 CABP2Q9NPB3 220 aa5.85□□□□□ -1.47
GABRB3-222ENST00000637226 EMP3P54852 163 aa5.82□□□□□ -1.48
GABRB3-222ENST00000637226 DPY19L2Q6NUT2 758 aa5.82□□□□□ -1.48
GABRB3-222ENST00000637226 ILDR1Q86SU0 546 aaPredicted RBP5.81□□□□□ -1.48
GABRB3-222ENST00000637226 SPNS2Q8IVW8 549 aa5.8□□□□□ -1.48
GABRB3-222ENST00000637226 BOLA1Q9Y3E2 137 aa5.8□□□□□ -1.48
GABRB3-222ENST00000637226 MMRN1Q13201 1228 aa5.79□□□□□ -1.48
GABRB3-222ENST00000637226 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
GABRB3-222ENST00000637226 FAM205CA6NFA0 338 aa5.78□□□□□ -1.48
GABRB3-222ENST00000637226 HS3ST6Q96QI5 342 aa5.77□□□□□ -1.49
GABRB3-222ENST00000637226 ZNF710Q8N1W2 664 aa5.76□□□□□ -1.49
GABRB3-222ENST00000637226 EFCAB3Q8N7B9 438 aa5.76□□□□□ -1.49
GABRB3-222ENST00000637226 POTEB3A0JP26 581 aa5.74□□□□□ -1.49
GABRB3-222ENST00000637226 DOK7Q18PE1 504 aa5.74□□□□□ -1.49
GABRB3-222ENST00000637226 POTEBQ6S5H4 581 aa5.74□□□□□ -1.49
GABRB3-222ENST00000637226 HOXB3P14651 431 aaPredicted RBP5.73□□□□□ -1.49
GABRB3-222ENST00000637226 RIMBP2O15034 1052 aa5.72□□□□□ -1.49
GABRB3-222ENST00000637226 HOXB1P14653 301 aaPredicted RBP5.72□□□□□ -1.49
GABRB3-222ENST00000637226 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
GABRB3-222ENST00000637226 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
GABRB3-222ENST00000637226 RIOK3O14730 519 aaKnown RBP5.71□□□□□ -1.5
GABRB3-222ENST00000637226 SOX12O15370 315 aa5.71□□□□□ -1.5
GABRB3-222ENST00000637226 ERBB3P21860 1342 aa5.71□□□□□ -1.5
GABRB3-222ENST00000637226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.69□□□□□ -1.5
GABRB3-222ENST00000637226 VGFO15240 615 aaPredicted RBP5.69□□□□□ -1.5
GABRB3-222ENST00000637226 MICALL2Q8IY33 904 aa5.69□□□□□ -1.5
GABRB3-222ENST00000637226 ZFP91Q96JP5 570 aaPredicted RBP5.69□□□□□ -1.5
GABRB3-222ENST00000637226 RNF25Q96BH1 459 aaPredicted RBP5.67□□□□□ -1.5
GABRB3-222ENST00000637226 PHF8Q9UPP1 1060 aa5.67□□□□□ -1.5
GABRB3-222ENST00000637226 TMEM92Q6UXU6 159 aa5.66□□□□□ -1.5
GABRB3-222ENST00000637226 VARS2Q5ST30 1063 aaKnown RBP5.65□□□□□ -1.5
GABRB3-222ENST00000637226 MS4A4AQ96JQ5 239 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms