RNA–Protein interactions for RNA: ENST00000636940.1

ARID1B-221, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 5,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-221ENST00000636940 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
ARID1B-221ENST00000636940 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
ARID1B-221ENST00000636940 TAOK2Q9UL54 1235 aa13.59□□□□□ -0.23
ARID1B-221ENST00000636940 MLECQ14165 292 aa13.59□□□□□ -0.23
ARID1B-221ENST00000636940 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
ARID1B-221ENST00000636940 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
ARID1B-221ENST00000636940 TMC1Q8TDI8 760 aa13.58□□□□□ -0.24
ARID1B-221ENST00000636940 CCDC9Q9Y3X0 531 aaKnown RBP13.57□□□□□ -0.24
ARID1B-221ENST00000636940 UPF2Q9HAU5 1272 aaKnown RBP13.56□□□□□ -0.24
ARID1B-221ENST00000636940 MYH16Q9H6N6 1097 aa13.56□□□□□ -0.24
ARID1B-221ENST00000636940 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
ARID1B-221ENST00000636940 CLSTN1O94985 981 aa13.55□□□□□ -0.24
ARID1B-221ENST00000636940 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
ARID1B-221ENST00000636940 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
ARID1B-221ENST00000636940 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
ARID1B-221ENST00000636940 FKBP8Q14318 412 aa13.54□□□□□ -0.24
ARID1B-221ENST00000636940 ISY1Q9ULR0 285 aaKnown RBP13.54□□□□□ -0.24
ARID1B-221ENST00000636940 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
ARID1B-221ENST00000636940 GOLGA2Q08379 1002 aa13.52□□□□□ -0.24
ARID1B-221ENST00000636940 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.24
ARID1B-221ENST00000636940 RGL3Q3MIN7 710 aa13.49□□□□□ -0.25
ARID1B-221ENST00000636940 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
ARID1B-221ENST00000636940 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.26
ARID1B-221ENST00000636940 IRX6P78412 446 aaPredicted RBP13.45□□□□□ -0.26
ARID1B-221ENST00000636940 SOX12O15370 315 aa13.44□□□□□ -0.26
ARID1B-221ENST00000636940 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
ARID1B-221ENST00000636940 POGKQ9P215 609 aa13.43□□□□□ -0.26
ARID1B-221ENST00000636940 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
ARID1B-221ENST00000636940 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
ARID1B-221ENST00000636940 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
ARID1B-221ENST00000636940 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.41□□□□□ -0.26
ARID1B-221ENST00000636940 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
ARID1B-221ENST00000636940 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
ARID1B-221ENST00000636940 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
ARID1B-221ENST00000636940 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
ARID1B-221ENST00000636940 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
ARID1B-221ENST00000636940 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
ARID1B-221ENST00000636940 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
ARID1B-221ENST00000636940 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
ARID1B-221ENST00000636940 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
ARID1B-221ENST00000636940 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
ARID1B-221ENST00000636940 PRM3Q9NNZ6 103 aa13.37□□□□□ -0.27
ARID1B-221ENST00000636940 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
ARID1B-221ENST00000636940 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
ARID1B-221ENST00000636940 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
ARID1B-221ENST00000636940 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
ARID1B-221ENST00000636940 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
ARID1B-221ENST00000636940 CLIP1P30622 1438 aa13.34□□□□□ -0.27
ARID1B-221ENST00000636940 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
ARID1B-221ENST00000636940 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
ARID1B-221ENST00000636940 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
ARID1B-221ENST00000636940 G3V3G9 751 aa13.33□□□□□ -0.28
ARID1B-221ENST00000636940 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
ARID1B-221ENST00000636940 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
ARID1B-221ENST00000636940 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
ARID1B-221ENST00000636940 NBR1Q14596 966 aa13.3□□□□□ -0.28
ARID1B-221ENST00000636940 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
ARID1B-221ENST00000636940 MSH5O43196 834 aa13.3□□□□□ -0.28
ARID1B-221ENST00000636940 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
ARID1B-221ENST00000636940 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
ARID1B-221ENST00000636940 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
ARID1B-221ENST00000636940 NCLP19338 710 aaKnown RBP13.29□□□□□ -0.28
ARID1B-221ENST00000636940 FGD1P98174 961 aa13.29□□□□□ -0.28
ARID1B-221ENST00000636940 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
ARID1B-221ENST00000636940 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
ARID1B-221ENST00000636940 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
ARID1B-221ENST00000636940 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
ARID1B-221ENST00000636940 CUX2O14529 1486 aa13.26□□□□□ -0.29
ARID1B-221ENST00000636940 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
ARID1B-221ENST00000636940 MIER1Q8N108 512 aa13.25□□□□□ -0.29
ARID1B-221ENST00000636940 MAPK8IP3Q9UPT6 1336 aa13.24□□□□□ -0.29
ARID1B-221ENST00000636940 EEA1Q15075 1411 aa13.24□□□□□ -0.29
ARID1B-221ENST00000636940 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
ARID1B-221ENST00000636940 KCNJ4P48050 445 aa13.21□□□□□ -0.29
ARID1B-221ENST00000636940 CARMIL2Q6F5E8 1435 aa13.21□□□□□ -0.3
ARID1B-221ENST00000636940 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.3
ARID1B-221ENST00000636940 CARD11Q9BXL7 1154 aa13.2□□□□□ -0.3
ARID1B-221ENST00000636940 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
ARID1B-221ENST00000636940 KANK1Q14678 1352 aa13.2□□□□□ -0.3
ARID1B-221ENST00000636940 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
ARID1B-221ENST00000636940 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
ARID1B-221ENST00000636940 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
ARID1B-221ENST00000636940 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
ARID1B-221ENST00000636940 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
ARID1B-221ENST00000636940 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
ARID1B-221ENST00000636940 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
ARID1B-221ENST00000636940 GGT6Q6P531 493 aa13.17□□□□□ -0.3
ARID1B-221ENST00000636940 SOGA1O94964 1423 aa13.17□□□□□ -0.3
ARID1B-221ENST00000636940 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
ARID1B-221ENST00000636940 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
ARID1B-221ENST00000636940 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
ARID1B-221ENST00000636940 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
ARID1B-221ENST00000636940 STK26Q9P289 416 aa13.14□□□□□ -0.31
ARID1B-221ENST00000636940 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
ARID1B-221ENST00000636940 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
ARID1B-221ENST00000636940 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
ARID1B-221ENST00000636940 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
ARID1B-221ENST00000636940 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
ARID1B-221ENST00000636940 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
ARID1B-221ENST00000636940 PDE4CQ08493 712 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms