RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 SUPT5HO00267 1087 aaKnown RBP3.16□□□□□ -1.9
GABRB3-220ENST00000636512 PODXL2Q9NZ53 605 aa3.16□□□□□ -1.9
GABRB3-220ENST00000636512 SPDYE2BA6NHP3 402 aa3.15□□□□□ -1.91
GABRB3-220ENST00000636512 STK25O00506 426 aa3.15□□□□□ -1.91
GABRB3-220ENST00000636512 SPDYE6P0CI01 402 aa3.15□□□□□ -1.91
GABRB3-220ENST00000636512 SPDYE2Q495Y8 402 aa3.15□□□□□ -1.91
GABRB3-220ENST00000636512 RIOK3O14730 519 aaKnown RBP3.14□□□□□ -1.91
GABRB3-220ENST00000636512 NEUROD2Q15784 382 aa3.14□□□□□ -1.91
GABRB3-220ENST00000636512 DCAF8Q5TAQ9 597 aa3.14□□□□□ -1.91
GABRB3-220ENST00000636512 LMOD2Q6P5Q4 547 aa3.14□□□□□ -1.91
GABRB3-220ENST00000636512 PABPN1Q86U42 306 aaKnown RBP eCLIP3.14□□□□□ -1.91
GABRB3-220ENST00000636512 VGFO15240 615 aaPredicted RBP3.13□□□□□ -1.91
GABRB3-220ENST00000636512 GTPBP6O43824 516 aaPredicted RBP3.13□□□□□ -1.91
GABRB3-220ENST00000636512 SPINK5Q9NQ38 1064 aaPredicted RBP3.13□□□□□ -1.91
GABRB3-220ENST00000636512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.12□□□□□ -1.91
GABRB3-220ENST00000636512 STK24Q9Y6E0 443 aa3.12□□□□□ -1.91
GABRB3-220ENST00000636512 ABCB7O75027 752 aa3.11□□□□□ -1.91
GABRB3-220ENST00000636512 BRPF1P55201 1214 aaPredicted RBP3.11□□□□□ -1.91
GABRB3-220ENST00000636512 NKX1-1Q15270 411 aaPredicted RBP3.1□□□□□ -1.91
GABRB3-220ENST00000636512 FAM212AQ96EL1 285 aa3.1□□□□□ -1.91
GABRB3-220ENST00000636512 SMYD5Q6GMV2 418 aa3.09□□□□□ -1.91
GABRB3-220ENST00000636512 NPM2Q86SE8 214 aaKnown RBP3.09□□□□□ -1.91
GABRB3-220ENST00000636512 RNF25Q96BH1 459 aaPredicted RBP3.09□□□□□ -1.91
GABRB3-220ENST00000636512 BCL11BQ9C0K0 894 aaPredicted RBP3.09□□□□□ -1.91
GABRB3-220ENST00000636512 SSUH2Q9Y2M2 353 aa3.09□□□□□ -1.91
GABRB3-220ENST00000636512 OSCARQ8IYS5 282 aa3.08□□□□□ -1.92
GABRB3-220ENST00000636512 RSPH6AQ9H0K4 717 aa3.08□□□□□ -1.92
GABRB3-220ENST00000636512 KCNV2Q8TDN2 545 aa3.07□□□□□ -1.92
GABRB3-220ENST00000636512 ZC3H15Q8WU90 426 aaKnown RBP3.07□□□□□ -1.92
GABRB3-220ENST00000636512 SGIP1Q9BQI5 828 aa3.07□□□□□ -1.92
GABRB3-220ENST00000636512 ZMYND15Q9H091 742 aa3.07□□□□□ -1.92
GABRB3-220ENST00000636512 SLC24A3Q9HC58 644 aa3.07□□□□□ -1.92
GABRB3-220ENST00000636512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.06□□□□□ -1.92
GABRB3-220ENST00000636512 UBTFP17480 764 aaKnown RBP3.06□□□□□ -1.92
GABRB3-220ENST00000636512 ARHGEF1Q92888 912 aaKnown RBP3.06□□□□□ -1.92
GABRB3-220ENST00000636512 ZFP91Q96JP5 570 aaPredicted RBP3.06□□□□□ -1.92
GABRB3-220ENST00000636512 ZBTB7CA1YPR0 619 aa3.05□□□□□ -1.92
GABRB3-220ENST00000636512 CHRM1P11229 460 aaPredicted RBP3.05□□□□□ -1.92
GABRB3-220ENST00000636512 NUBP1P53384 320 aa3.05□□□□□ -1.92
GABRB3-220ENST00000636512 C1QBPQ07021 282 aaKnown RBP3.05□□□□□ -1.92
GABRB3-220ENST00000636512 KRI1Q8N9T8 703 aaKnown RBP3.05□□□□□ -1.92
GABRB3-220ENST00000636512 ARID3AQ99856 593 aa3.05□□□□□ -1.92
GABRB3-220ENST00000636512 TRIM26Q12899 539 aaPredicted RBP3.04□□□□□ -1.92
GABRB3-220ENST00000636512 E2F4Q16254 413 aa3.04□□□□□ -1.92
GABRB3-220ENST00000636512 PDIA4P13667 645 aaKnown RBP3.03□□□□□ -1.92
GABRB3-220ENST00000636512 CCDC9Q9Y3X0 531 aaKnown RBP3.03□□□□□ -1.92
GABRB3-220ENST00000636512 PYGBP11216 843 aa3.02□□□□□ -1.93
GABRB3-220ENST00000636512 IL27Q8NEV9 243 aa3.02□□□□□ -1.93
GABRB3-220ENST00000636512 AK7Q96M32 723 aa3.02□□□□□ -1.93
GABRB3-220ENST00000636512 RNF39Q9H2S5 420 aa3.02□□□□□ -1.93
GABRB3-220ENST00000636512 TESPA1A2RU30 521 aaPredicted RBP3.01□□□□□ -1.93
GABRB3-220ENST00000636512 SEMA3EO15041 775 aa3.01□□□□□ -1.93
GABRB3-220ENST00000636512 ZMYND10O75800 440 aa3.01□□□□□ -1.93
GABRB3-220ENST00000636512 PRR29P0C7W0 189 aa3.01□□□□□ -1.93
GABRB3-220ENST00000636512 ZNF467Q7Z7K2 595 aaPredicted RBP3.01□□□□□ -1.93
GABRB3-220ENST00000636512 SPDYE1Q8NFV5 336 aaPredicted RBP3.01□□□□□ -1.93
GABRB3-220ENST00000636512 DSG3P32926 999 aa3□□□□□ -1.93
GABRB3-220ENST00000636512 CADPS2Q86UW7 1296 aa3□□□□□ -1.93
GABRB3-220ENST00000636512 CLEC11AQ9Y240 323 aa3□□□□□ -1.93
GABRB3-220ENST00000636512 APBB1O00213 710 aa2.99□□□□□ -1.93
GABRB3-220ENST00000636512 PDE4AP27815 886 aa2.99□□□□□ -1.93
GABRB3-220ENST00000636512 FLIIQ13045 1269 aa2.99□□□□□ -1.93
GABRB3-220ENST00000636512 BARGINQ6ZT62 677 aa2.99□□□□□ -1.93
GABRB3-220ENST00000636512 HRCP23327 699 aa2.98□□□□□ -1.93
GABRB3-220ENST00000636512 PDAP1Q13442 181 aaKnown RBP2.98□□□□□ -1.93
GABRB3-220ENST00000636512 GPIHBP1Q8IV16 184 aa2.98□□□□□ -1.93
GABRB3-220ENST00000636512 KDM4CQ9H3R0 1056 aa2.98□□□□□ -1.93
GABRB3-220ENST00000636512 GPBP1L1Q9HC44 474 aaPredicted RBP2.98□□□□□ -1.93
GABRB3-220ENST00000636512 NLRP6P59044 892 aa2.97□□□□□ -1.93
GABRB3-220ENST00000636512 RASEFQ8IZ41 740 aa2.97□□□□□ -1.93
GABRB3-220ENST00000636512 ZNF316A6NFI3 1004 aaPredicted RBP2.96□□□□□ -1.94
GABRB3-220ENST00000636512 DDRGK1Q96HY6 314 aa2.96□□□□□ -1.94
GABRB3-220ENST00000636512 LARP6Q9BRS8 491 aaKnown RBP2.96□□□□□ -1.94
GABRB3-220ENST00000636512 ARID3CA6NKF2 412 aa2.95□□□□□ -1.94
GABRB3-220ENST00000636512 PSEN1P49768 467 aa2.95□□□□□ -1.94
GABRB3-220ENST00000636512 PDE4DQ08499 809 aa2.95□□□□□ -1.94
GABRB3-220ENST00000636512 CREBZFQ9NS37 354 aa2.95□□□□□ -1.94
GABRB3-220ENST00000636512 TRIM66O15016 1216 aa2.94□□□□□ -1.94
GABRB3-220ENST00000636512 SOX12O15370 315 aa2.94□□□□□ -1.94
GABRB3-220ENST00000636512 KCTD17Q8N5Z5 321 aa2.94□□□□□ -1.94
GABRB3-220ENST00000636512 DDX27Q96GQ7 796 aaKnown RBP2.94□□□□□ -1.94
GABRB3-220ENST00000636512 MFRPQ9BY79 579 aa2.94□□□□□ -1.94
GABRB3-220ENST00000636512 TSPYL2Q9H2G4 693 aaPredicted RBP2.94□□□□□ -1.94
GABRB3-220ENST00000636512 ATP1B4Q9UN42 357 aaPredicted RBP2.94□□□□□ -1.94
GABRB3-220ENST00000636512 MKRN3Q13064 507 aaKnown RBP2.93□□□□□ -1.94
GABRB3-220ENST00000636512 RBM26Q5T8P6 1007 aaKnown RBP2.93□□□□□ -1.94
GABRB3-220ENST00000636512 ARIH1Q9Y4X5 557 aaPredicted RBP2.93□□□□□ -1.94
GABRB3-220ENST00000636512 RAD21O60216 631 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 PPP1R37O75864 691 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 MNX1P50219 401 aaPredicted RBP2.92□□□□□ -1.94
GABRB3-220ENST00000636512 GOLGA2Q08379 1002 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 AEBP1Q8IUX7 1158 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 ZNF579Q8NAF0 562 aaKnown RBP2.92□□□□□ -1.94
GABRB3-220ENST00000636512 AKT1S1Q96B36 256 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 CCDC97Q96F63 343 aaPredicted RBP2.92□□□□□ -1.94
GABRB3-220ENST00000636512 PCMTD1Q96MG8 357 aaPredicted RBP2.92□□□□□ -1.94
GABRB3-220ENST00000636512 RBM42Q9BTD8 480 aaKnown RBP2.92□□□□□ -1.94
GABRB3-220ENST00000636512 CABP2Q9NPB3 220 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 PCDHB8Q9UN66 801 aa2.92□□□□□ -1.94
GABRB3-220ENST00000636512 PCDHB13Q9Y5F0 798 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms