RNA–Protein interactions for RNA: ENST00000636390.1

CACNB4-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 4

Gene CACNB4, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-224ENST00000636390 MS4A3Q96HJ5 214 aa13.14□□□□□ -0.31
CACNB4-224ENST00000636390 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
CACNB4-224ENST00000636390 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
CACNB4-224ENST00000636390 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
CACNB4-224ENST00000636390 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
CACNB4-224ENST00000636390 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
CACNB4-224ENST00000636390 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
CACNB4-224ENST00000636390 C7P10643 843 aa13.05□□□□□ -0.32
CACNB4-224ENST00000636390 PROM2Q8N271 834 aa12.99□□□□□ -0.33
CACNB4-224ENST00000636390 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
CACNB4-224ENST00000636390 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
CACNB4-224ENST00000636390 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
CACNB4-224ENST00000636390 ATN1P54259 1190 aaPredicted RBP12.95□□□□□ -0.34
CACNB4-224ENST00000636390 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
CACNB4-224ENST00000636390 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
CACNB4-224ENST00000636390 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
CACNB4-224ENST00000636390 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
CACNB4-224ENST00000636390 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
CACNB4-224ENST00000636390 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
CACNB4-224ENST00000636390 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
CACNB4-224ENST00000636390 TIE1P35590 1138 aa12.82□□□□□ -0.36
CACNB4-224ENST00000636390 MAP3K13O43283 966 aa12.8□□□□□ -0.36
CACNB4-224ENST00000636390 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-224ENST00000636390 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
CACNB4-224ENST00000636390 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.37
CACNB4-224ENST00000636390 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
CACNB4-224ENST00000636390 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
CACNB4-224ENST00000636390 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
CACNB4-224ENST00000636390 MIER1Q8N108 512 aa12.71□□□□□ -0.37
CACNB4-224ENST00000636390 SEC24BO95487 1268 aa12.67□□□□□ -0.38
CACNB4-224ENST00000636390 IER5LQ5T953 404 aa12.66□□□□□ -0.38
CACNB4-224ENST00000636390 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
CACNB4-224ENST00000636390 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
CACNB4-224ENST00000636390 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
CACNB4-224ENST00000636390 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
CACNB4-224ENST00000636390 NACADO15069 1562 aa12.57□□□□□ -0.4
CACNB4-224ENST00000636390 NUBP1P53384 320 aa12.57□□□□□ -0.4
CACNB4-224ENST00000636390 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
CACNB4-224ENST00000636390 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
CACNB4-224ENST00000636390 UNC13AQ9UPW8 1703 aa12.56□□□□□ -0.4
CACNB4-224ENST00000636390 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
CACNB4-224ENST00000636390 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
CACNB4-224ENST00000636390 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
CACNB4-224ENST00000636390 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
CACNB4-224ENST00000636390 ST18O60284 1047 aa12.5□□□□□ -0.41
CACNB4-224ENST00000636390 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
CACNB4-224ENST00000636390 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
CACNB4-224ENST00000636390 PLCG2P16885 1265 aa12.48□□□□□ -0.41
CACNB4-224ENST00000636390 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
CACNB4-224ENST00000636390 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
CACNB4-224ENST00000636390 CECR2Q9BXF3 1484 aa12.37□□□□□ -0.43
CACNB4-224ENST00000636390 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
CACNB4-224ENST00000636390 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
CACNB4-224ENST00000636390 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.43
CACNB4-224ENST00000636390 PYGBP11216 843 aa12.3□□□□□ -0.44
CACNB4-224ENST00000636390 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
CACNB4-224ENST00000636390 SNPHO15079 494 aa12.29□□□□□ -0.44
CACNB4-224ENST00000636390 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
CACNB4-224ENST00000636390 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
CACNB4-224ENST00000636390 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
CACNB4-224ENST00000636390 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
CACNB4-224ENST00000636390 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
CACNB4-224ENST00000636390 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
CACNB4-224ENST00000636390 PDCD7Q8N8D1 485 aaKnown RBP12.22□□□□□ -0.45
CACNB4-224ENST00000636390 FKBP8Q14318 412 aa12.21□□□□□ -0.45
CACNB4-224ENST00000636390 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
CACNB4-224ENST00000636390 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
CACNB4-224ENST00000636390 EMP3P54852 163 aa12.13□□□□□ -0.47
CACNB4-224ENST00000636390 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
CACNB4-224ENST00000636390 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
CACNB4-224ENST00000636390 SHROOM4Q9ULL8 1493 aa12.12□□□□□ -0.47
CACNB4-224ENST00000636390 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
CACNB4-224ENST00000636390 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
CACNB4-224ENST00000636390 GSE1Q14687 1217 aa12.08□□□□□ -0.48
CACNB4-224ENST00000636390 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
CACNB4-224ENST00000636390 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
CACNB4-224ENST00000636390 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CACNB4-224ENST00000636390 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
CACNB4-224ENST00000636390 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
CACNB4-224ENST00000636390 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
CACNB4-224ENST00000636390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNB4-224ENST00000636390 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
CACNB4-224ENST00000636390 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CACNB4-224ENST00000636390 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
CACNB4-224ENST00000636390 PSEN1P49768 467 aa12.03□□□□□ -0.48
CACNB4-224ENST00000636390 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
CACNB4-224ENST00000636390 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
CACNB4-224ENST00000636390 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
CACNB4-224ENST00000636390 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
CACNB4-224ENST00000636390 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
CACNB4-224ENST00000636390 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
CACNB4-224ENST00000636390 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
CACNB4-224ENST00000636390 CUX2O14529 1486 aa11.94□□□□□ -0.5
CACNB4-224ENST00000636390 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
CACNB4-224ENST00000636390 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
CACNB4-224ENST00000636390 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
CACNB4-224ENST00000636390 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
CACNB4-224ENST00000636390 G3V3G9 751 aa11.86□□□□□ -0.51
CACNB4-224ENST00000636390 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
CACNB4-224ENST00000636390 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms